Z. japonica Nagirizaki
Zjn_sc00003.1.g10590.1.am.mk
Sequence
-
BLAST
| TAIR10 |
No_hits |
| NR |
ref|XP_004985485.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
118 |
1 |
66 |
1e-16 |
153.4 |
44.9 |
47.5 |
| Subject |
181 |
1 |
61 |
|
| Annot |
PREDICTED: protein TIFY 10A-like [Setaria italica] |
| IRGSP |
No_hits |
| Sbicolor |
Sobic.001G482600.1.p|Chr01|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
118 |
1 |
66 |
2e-15 |
164.4 |
46.6 |
50 |
| Subject |
194 |
1 |
64 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00003.1.g10590.1.am.mk |
length: 118 aa. |
| IPR018467 |
CO/COL/TOC1, conserved site |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF09425 |
CCT_2 |
4.2e-09 |
65-86 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
32-44 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 2 | 15996596 | 15997531 | -
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00003.1 |
maker_non_over |
exon |
4839833 |
4839997 |
. |
- |
. |
ID=Zjn_sc00003.1.g10590.1.am.mk:exon:2 |
| Zjn_sc00003.1 |
maker_non_over |
exon |
4840577 |
4840768 |
. |
- |
. |
ID=Zjn_sc00003.1.g10590.1.am.mk:exon:1 |