Z. japonica Nagirizaki
Zjn_sc00003.1.g10420.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G72360.3 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 328 1 314 1e-32 79.3 32.6 47.3
Subject 260 1 260
Annot | Symbols: HRE1 | Integrase-type DNA-binding superfamily protein | chr1:27241904-27242777 FORWARD LENGTH=260
NR ref|XP_012698500.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 328 1 328 1e-72 93.6 60.7 69.8
Subject 307 1 307
Annot PREDICTED: ethylene-responsive transcription factor ERF073-like [Setaria italica]
IRGSP Os03t0183300-01_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 328 1 323 1e-61 100.3 57.9 66.8
Subject 329 1 322
Annot
Sbicolor Sobic.001G481200.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 328 1 328 8e-68 98.8 59.8 68
Subject 324 1 324
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00003.1.g10420.1.sm.mk length: 328 aa.
IPR001471 AP2/ERF domain
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
FPrintScan PR00367 ETHRSPELEMNT 2.5e-10 96-107
118-134
Gene3D G3DSA:3.30.730.10 no description 1.7e-30 95-153
HMMPfam PF00847 AP2 5.4e-16 95-144
HMMSmart SM00380 DNA-binding 2.4e-37 95-158
ProfileScan PS51032 AP2_ERF 24.698 95-152
IPR016177 DNA-binding domain
Molecular Function GO:0003677 DNA binding    
superfamily SSF54171 DNA-binding 1.1e-23 94-155
no_ID  
HMMPanther PTHR31190 FAMILY 2.4e-51 2-325
HMMPanther PTHR31190:SF0 SUBFAMILY 2.4e-51 2-325
Seg seg seg NA 38-59
60-70
125-141
252-266
281-286
Pseudomolecule
Chromosome Start End Strand
21591988615920872+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00003.1 maker_non_over exon 4763123 4764109 . + . ID=Zjn_sc00003.1.g10420.1.sm.mk:exon:1

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