Z. japonica Nagirizaki
Zjn_sc00003.1.g10260.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G20340.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 485 29 482 e-117 101 45.6 60.6
Subject 490 12 488
Annot | Symbols: | Pyridoxal phosphate (PLP)-dependent transferases superfamily protein | chr2:8779804-8782490 FORWARD LENGTH=490
NR ref|XP_004981646.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 485 1 483 0.0 109.1 80.8 86.8
Subject 529 1 518
Annot PREDICTED: tyrosine decarboxylase 1-like [Setaria italica]
IRGSP Os01t0770200-01_chr01_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 485 1 483 0.0 109.9 79.8 85.8
Subject 533 1 530
Annot
Sbicolor Sobic.003G309700.1.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 485 1 483 0.0 110.7 79 84.9
Subject 537 1 527
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00003.1.g10260.1.am.mk length: 485 aa.
IPR002129 Pyridoxal phosphate-dependent decarboxylase
method AccNumber shortName E-value location
Molecular Function GO:0016831 carboxy-lyase activity    
Biological Process GO:0019752 carboxylic acid metabolic process    
Molecular Function GO:0030170 pyridoxal phosphate binding    
HMMPfam PF00282 Pyridoxal_deC 3.6e-96 55-411
IPR010977 Aromatic-L-amino-acid decarboxylase
Biological Process GO:0006520 cellular amino acid metabolic process    
Molecular Function GO:0016831 carboxy-lyase activity    
FPrintScan PR00800 YHDCRBOXLASE 4.4e-19 46-63
92-111
113-131
369-384
IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.40.640.10 no description 7.2e-79 103-396
IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.90.1150.10 no description 5.7e-15 419-483
IPR015424 Pyridoxal phosphate-dependent transferase
superfamily SSF53383 PLP-dependent 1.1e-89 29-483
no_ID  
Gene3D G3DSA:1.20.1340.10 no description 4e-17 30-100
HMMPanther PTHR11999 GROUP 5.9e-183 29-484
HMMPanther PTHR11999:SF11 AROMATIC 5.9e-183 29-484
Seg seg seg NA 139-155
422-431
Pseudomolecule
Chromosome Start End Strand
21585537015856972-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00003.1 maker_non_over exon 4698607 4698841 . - . ID=Zjn_sc00003.1.g10260.1.am.mk:exon:4
Zjn_sc00003.1 maker_non_over exon 4698904 4699734 . - . ID=Zjn_sc00003.1.g10260.1.am.mk:exon:3
Zjn_sc00003.1 maker_non_over exon 4699771 4700005 . - . ID=Zjn_sc00003.1.g10260.1.am.mk:exon:2
Zjn_sc00003.1 maker_non_over exon 4700053 4700209 . - . ID=Zjn_sc00003.1.g10260.1.am.mk:exon:1

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