Z. japonica Nagirizaki
Zjn_sc00003.1.g10240.1.am.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G26540.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 299 43 291 2e-73 107.4 48.5 59.2
Subject 321 65 308
Annot | Symbols: HEMD, UROS, ATUROS, ATDUF3, DUF3 | uroporphyrinogen-III synthase family protein | chr2:11287666-11290224 REVERSE LENGTH=321
NR ref|XP_002468373.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 299 1 298 e-106 99 69.2 78.9
Subject 296 1 291
Annot hypothetical protein SORBIDRAFT_01g044830 [Sorghum bicolor] gi|241922227|gb|EER95371.1| hypothetical protein SORBIDRAFT_01g044830 [Sorghum bicolor]
IRGSP Os03t0186100-01_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 299 1 292 e-100 101 67.9 75.9
Subject 302 1 291
Annot
Sbicolor Sobic.001G478600.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 299 1 298 e-109 99 69.2 78.9
Subject 296 1 291
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00003.1.g10240.1.am.mkhc length: 299 aa.
IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase
method AccNumber shortName E-value location
Molecular Function GO:0004852 uroporphyrinogen-III synthase activity    
Biological Process GO:0033014 tetrapyrrole biosynthetic process    
HMMPfam PF02602 HEM4 3.7e-31 83-285
superfamily SSF69618 HemD-like 3.2e-27 75-292
no_ID  
Gene3D G3DSA:3.40.50.10090 no description 4.8e-08 82-156
227-291
HMMPanther PTHR21091 METHYLTETRAHYDROFOLATE:HOMOCYSTEINE 2.7e-20 204-292
HMMPanther PTHR21091:SF25 UROPORPHYRINOGEN 2.7e-20 204-292
Seg seg seg NA 141-153
216-236
Pseudomolecule
Chromosome Start End Strand
21585029215854191-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00003.1 maker exon 4693529 4693913 . - . ID=Zjn_sc00003.1.g10240.1.am.mkhc:exon:9
Zjn_sc00003.1 maker exon 4694019 4694058 . - . ID=Zjn_sc00003.1.g10240.1.am.mkhc:exon:8
Zjn_sc00003.1 maker exon 4694223 4694357 . - . ID=Zjn_sc00003.1.g10240.1.am.mkhc:exon:7
Zjn_sc00003.1 maker exon 4694651 4694736 . - . ID=Zjn_sc00003.1.g10240.1.am.mkhc:exon:6
Zjn_sc00003.1 maker exon 4695597 4695700 . - . ID=Zjn_sc00003.1.g10240.1.am.mkhc:exon:5
Zjn_sc00003.1 maker exon 4695828 4695946 . - . ID=Zjn_sc00003.1.g10240.1.am.mkhc:exon:4
Zjn_sc00003.1 maker exon 4696209 4696275 . - . ID=Zjn_sc00003.1.g10240.1.am.mkhc:exon:3
Zjn_sc00003.1 maker exon 4696531 4696618 . - . ID=Zjn_sc00003.1.g10240.1.am.mkhc:exon:2
Zjn_sc00003.1 maker exon 4697183 4697428 . - . ID=Zjn_sc00003.1.g10240.1.am.mkhc:exon:1

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