Z. japonica Nagirizaki
Zjn_sc00003.1.g07440.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G49680.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 407 73 373 e-133 101.5 52.1 65.1
Subject 413 78 375
Annot | Symbols: ATBCAT-3, BCAT3 | branched-chain aminotransferase 3 | chr3:18422768-18425473 FORWARD LENGTH=413
NR ref|XP_006651192.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 407 10 373 e-171 102.5 73.7 80.6
Subject 417 11 380
Annot PREDICTED: branched-chain-amino-acid aminotransferase 3, chloroplastic-like [Oryza brachyantha]
IRGSP Os03t0231600-01_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 407 10 373 e-166 102 73.5 78.9
Subject 415 12 378
Annot
Sbicolor Sobic.001G447500.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 407 4 373 e-170 100.7 74.2 80.1
Subject 410 2 373
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00003.1.g07440.1.sm.mkhc length: 407 aa.
IPR001544 Aminotransferase, class IV
method AccNumber shortName E-value location
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
HMMPanther PTHR11825 SUBGROUP 7.8e-148 59-373
HMMPfam PF01063 Aminotran_4 4.1e-33 147-368
superfamily SSF56752 D-aminoacid 2.6e-91 49-374
IPR005786 Branched-chain amino acid aminotransferase II
Molecular Function GO:0004084 branched-chain-amino-acid transaminase activity    
Biological Process GO:0009081 branched-chain amino acid metabolic process    
HMMPIR PIRSF006468 Branched-chain 1e-124 52-404
HMMPanther PTHR11825:SF2 BRANCHED-CHAIN 7.8e-148 59-373
HMMTigr TIGR01123 ilvE_II: 4e-88 105-395
IPR018300 Aminotransferase, class IV, conserved site
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
PatternScan PS00770 AA_TRANSFER_CLASS_4 NA 293-322
no_ID  
Gene3D G3DSA:3.20.10.10 no description 2.7e-53 235-374
Gene3D G3DSA:3.30.470.10 no description 7.3e-68 65-234
Seg seg seg NA 2-12
200-215
357-368
Pseudomolecule
Chromosome Start End Strand
21464706114654348+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00003.1 maker exon 3490298 3491206 . + . ID=Zjn_sc00003.1.g07440.1.sm.mkhc:exon:1
Zjn_sc00003.1 maker exon 3491446 3491519 . + . ID=Zjn_sc00003.1.g07440.1.sm.mkhc:exon:2
Zjn_sc00003.1 maker exon 3491634 3491820 . + . ID=Zjn_sc00003.1.g07440.1.sm.mkhc:exon:3
Zjn_sc00003.1 maker exon 3491947 3492126 . + . ID=Zjn_sc00003.1.g07440.1.sm.mkhc:exon:4
Zjn_sc00003.1 maker exon 3492221 3492451 . + . ID=Zjn_sc00003.1.g07440.1.sm.mkhc:exon:5
Zjn_sc00003.1 maker exon 3492525 3492737 . + . ID=Zjn_sc00003.1.g07440.1.sm.mkhc:exon:6
Zjn_sc00003.1 maker exon 3492838 3492950 . + . ID=Zjn_sc00003.1.g07440.1.sm.mkhc:exon:7
Zjn_sc00003.1 maker exon 3494042 3494106 . + . ID=Zjn_sc00003.1.g07440.1.sm.mkhc:exon:8
Zjn_sc00003.1 maker exon 3494494 3497585 . + . ID=Zjn_sc00003.1.g07440.1.sm.mkhc:exon:9

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