Z. japonica Nagirizaki
Zjn_sc00003.1.g05930.1.sm.mk
Sequence
-
BLAST
| TAIR10 |
AT2G06925.1 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
178 |
84 |
167 |
9e-24 |
83.1 |
28.1 |
34.3 |
| Subject |
148 |
6 |
91 |
|
| Annot |
| Symbols: ATSPLA2-ALPHA, PLA2-ALPHA | Phospholipase A2 family protein | chr2:2842475-2843212 REVERSE LENGTH=148 |
| NR |
ref|NP_001148238.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
178 |
73 |
167 |
2e-32 |
92.7 |
43.3 |
47.8 |
| Subject |
165 |
3 |
105 |
|
| Annot |
LOC100281846 precursor [Zea mays] gi|195616866|gb|ACG30263.1| phospholipase A2 [Zea mays] |
| IRGSP |
Os03t0261100-01_chr03_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
178 |
92 |
167 |
1e-33 |
86 |
34.3 |
38.2 |
| Subject |
153 |
20 |
95 |
|
| Annot |
|
| Sbicolor |
Sobic.001G429900.1.p|Chr01|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
178 |
73 |
167 |
1e-33 |
86.5 |
40.4 |
44.9 |
| Subject |
154 |
1 |
94 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00003.1.g05930.1.sm.mk |
length: 178 aa. |
| IPR013090 |
Phospholipase A2, active site |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0004623 |
phospholipase A2 activity |
|
|
| Biological Process |
GO:0006644 |
phospholipid metabolic process |
|
|
| Biological Process |
GO:0016042 |
lipid catabolic process |
|
|
| PatternScan |
PS00118 |
PA2_HIS |
NA |
154-161 |
| IPR016090 |
Phospholipase A2 domain |
| Gene3D |
G3DSA:1.20.90.10 |
no description |
4.2e-08 |
118-171 |
| HMMPfam |
PF00068 |
Phospholip_A2_1 |
7.6e-06 |
129-172 |
| superfamily |
SSF48619 |
Phospholipase |
2e-13 |
127-167 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
78-95 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 2 | 13932915 | 13933848 | -
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00003.1 |
maker_non_over |
exon |
2776152 |
2776315 |
. |
- |
. |
ID=Zjn_sc00003.1.g05930.1.sm.mk:exon:4 |
| Zjn_sc00003.1 |
maker_non_over |
exon |
2776537 |
2776582 |
. |
- |
. |
ID=Zjn_sc00003.1.g05930.1.sm.mk:exon:3 |
| Zjn_sc00003.1 |
maker_non_over |
exon |
2776668 |
2776832 |
. |
- |
. |
ID=Zjn_sc00003.1.g05930.1.sm.mk:exon:2 |
| Zjn_sc00003.1 |
maker_non_over |
exon |
2776924 |
2777085 |
. |
- |
. |
ID=Zjn_sc00003.1.g05930.1.sm.mk:exon:1 |