Z. japonica Nagirizaki
Zjn_sc00003.1.g04460.1.sm.mkhc
Sequence
-
BLAST
| TAIR10 |
AT3G53520.1 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
135 |
1 |
73 |
3e-37 |
322.2 |
51.1 |
52.6 |
| Subject |
435 |
212 |
284 |
|
| Annot |
| Symbols: UXS1, ATUXS1 | UDP-glucuronic acid decarboxylase 1 | chr3:19841635-19844057 FORWARD LENGTH=435 |
| NR |
ref|XP_008789000.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
135 |
1 |
135 |
4e-47 |
306.7 |
74.8 |
87.4 |
| Subject |
414 |
221 |
414 |
|
| Annot |
PREDICTED: UDP-glucuronic acid decarboxylase 1-like isoform X2 [Phoenix dactylifera] |
| IRGSP |
Os03t0280800-01_chr03_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
135 |
1 |
73 |
1e-39 |
310.4 |
54.1 |
54.1 |
| Subject |
419 |
200 |
272 |
|
| Annot |
|
| Sbicolor |
Sobic.001G414700.1.p|Chr01|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
135 |
1 |
73 |
1e-39 |
166.7 |
54.1 |
54.1 |
| Subject |
225 |
7 |
79 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00003.1.g04460.1.sm.mkhc |
length: 135 aa. |
| IPR001509 |
NAD-dependent epimerase/dehydratase |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Biological Process |
GO:0044237 |
cellular metabolic process |
|
|
| Molecular Function |
GO:0050662 |
coenzyme binding |
|
|
| HMMPfam |
PF01370 |
Epimerase |
6e-08 |
1-74 |
| IPR016040 |
NAD(P)-binding domain |
| Gene3D |
G3DSA:3.40.50.720 |
no description |
6.7e-26 |
1-72 |
| no_ID |
|
| Gene3D |
G3DSA:3.90.25.10 |
no description |
7.8e-14 |
73-132 |
| HMMPanther |
PTHR10366 |
NAD |
3.7e-43 |
1-135 |
| HMMPanther |
PTHR10366:SF35 |
DTDP-GLUCOSE |
3.7e-43 |
1-135 |
| superfamily |
SSF51735 |
NAD(P)-binding |
1.5e-19 |
1-135 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 2 | 13306177 | 13309036 | +
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00003.1 |
maker |
exon |
2149414 |
2149509 |
. |
+ |
. |
ID=Zjn_sc00003.1.g04460.1.sm.mkhc:exon:1 |
| Zjn_sc00003.1 |
maker |
exon |
2149737 |
2149884 |
. |
+ |
. |
ID=Zjn_sc00003.1.g04460.1.sm.mkhc:exon:2 |
| Zjn_sc00003.1 |
maker |
exon |
2149989 |
2150068 |
. |
+ |
. |
ID=Zjn_sc00003.1.g04460.1.sm.mkhc:exon:3 |
| Zjn_sc00003.1 |
maker |
exon |
2151373 |
2152273 |
. |
+ |
. |
ID=Zjn_sc00003.1.g04460.1.sm.mkhc:exon:4 |