Z. japonica Nagirizaki
Zjn_sc00003.1.g03990.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G37090.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 222 8 218 5e-40 158.1 41.9 63.1
Subject 351 1 232
Annot | Symbols: IRX9 | Nucleotide-diphospho-sugar transferases superfamily protein | chr2:15587671-15589223 REVERSE LENGTH=351
NR ref|XP_004984832.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 222 1 218 2e-98 157.7 85.6 88.3
Subject 350 1 226
Annot PREDICTED: probable glucuronosyltransferase Os03g0287800 [Setaria italica]
IRGSP Os03t0287800-00_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 222 1 217 3e-88 175.2 81.1 84.7
Subject 389 1 217
Annot
Sbicolor Sobic.001G409100.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 222 1 218 5e-95 165.3 85.1 87.4
Subject 367 1 228
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00003.1.g03990.1.sm.mk length: 222 aa.
IPR005027 Glycosyl transferase, family 43
method AccNumber shortName E-value location
Molecular Function GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity    
Cellular Component GO:0016020 membrane    
HMMPanther PTHR10896 GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 1.5e-70 2-219
HMMPfam PF03360 Glyco_transf_43 1.9e-20 121-219
no_ID  
Gene3D G3DSA:3.90.550.10 no description 2.9e-35 95-219
HMMPanther PTHR10896:SF1 BETA-1,3-GLUCURONYLTRANSFERASE 1.5e-70 2-219
Seg seg seg NA 78-92
125-133
superfamily SSF53448 Nucleotide-diphospho-sugar 1.2e-31 95-219
Pseudomolecule
Chromosome Start End Strand
21309809313098836-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00003.1 maker_non_over exon 1941330 1941345 . - . ID=Zjn_sc00003.1.g03990.1.sm.mk:exon:2
Zjn_sc00003.1 maker_non_over exon 1941421 1942073 . - . ID=Zjn_sc00003.1.g03990.1.sm.mk:exon:1

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