Z. japonica Nagirizaki
Zjn_sc00003.1.g03850.1.sm.mkhc
Sequence
-
BLAST
| TAIR10 |
AT5G05600.1 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
312 |
31 |
304 |
2e-88 |
118.9 |
48.7 |
63.5 |
| Subject |
371 |
20 |
289 |
|
| Annot |
| Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr5:1672266-1674602 FORWARD LENGTH=371 |
| NR |
ref|XP_002465421.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
312 |
21 |
304 |
e-129 |
122.8 |
76.6 |
79.5 |
| Subject |
383 |
1 |
286 |
|
| Annot |
hypothetical protein SORBIDRAFT_01g038520 [Sorghum bicolor] gi|241919275|gb|EER92419.1| hypothetical protein SORBIDRAFT_01g038520 [Sorghum bicolor] |
| IRGSP |
Os03t0289800-01_chr03_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
312 |
21 |
304 |
e-128 |
124 |
72.8 |
77.9 |
| Subject |
387 |
1 |
280 |
|
| Annot |
|
| Sbicolor |
Sobic.001G407800.1.p|Chr01|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
312 |
21 |
304 |
e-132 |
122.8 |
76.6 |
79.5 |
| Subject |
383 |
1 |
286 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00003.1.g03850.1.sm.mkhc |
length: 312 aa. |
| IPR005123 |
Oxoglutarate/iron-dependent dioxygenase |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0016491 |
oxidoreductase activity |
|
|
| Molecular Function |
GO:0016706 |
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors |
|
|
| Biological Process |
GO:0055114 |
oxidation-reduction process |
|
|
| HMMPfam |
PF03171 |
2OG-FeII_Oxy |
2.2e-12 |
237-306 |
| ProfileScan |
PS51471 |
FE2OG_OXY |
9.631 |
232-312 |
| IPR026992 |
Non-haem dioxygenase N-terminal domain |
| HMMPfam |
PF14226 |
DIOX_N |
2e-25 |
81-186 |
| IPR027443 |
Isopenicillin N synthase-like |
| Gene3D |
G3DSA:2.60.120.330 |
no description |
5e-82 |
35-305 |
| no_ID |
|
| HMMPanther |
PTHR10209 |
OXIDOREDUCTASE, |
6e-111 |
38-306 |
| HMMPanther |
PTHR10209:SF55 |
OXIDOREDUCTASE, |
6e-111 |
38-306 |
| Seg |
seg |
seg |
NA |
56-74 |
| superfamily |
SSF51197 |
Clavaminate |
5.4e-78 |
33-306 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 2 | 13036761 | 13038050 | +
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00003.1 |
maker |
exon |
1879998 |
1880583 |
. |
+ |
. |
ID=Zjn_sc00003.1.g03850.1.sm.mkhc:exon:1 |
| Zjn_sc00003.1 |
maker |
exon |
1880705 |
1881041 |
. |
+ |
. |
ID=Zjn_sc00003.1.g03850.1.sm.mkhc:exon:2 |
| Zjn_sc00003.1 |
maker |
exon |
1881261 |
1881287 |
. |
+ |
. |
ID=Zjn_sc00003.1.g03850.1.sm.mkhc:exon:3 |