Z. japonica Nagirizaki
Zjn_sc00003.1.g03840.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G11170.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 316 43 312 1e-83 141.1 57.9 66.5
Subject 446 60 421
Annot | Symbols: FAD7, FADD | fatty acid desaturase 7 | chr3:3499959-3502126 FORWARD LENGTH=446
NR ref|XP_004984851.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 316 36 312 e-116 137.7 76.3 78.2
Subject 435 43 418
Annot PREDICTED: omega-3 fatty acid desaturase, chloroplastic-like [Setaria italica]
IRGSP Os03t0290300-01_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 316 157 312 6e-63 87.3 41.1 44
Subject 276 18 252
Annot
Sbicolor Sobic.001G407600.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 316 36 312 e-117 142.7 78.5 80.7
Subject 451 46 427
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00003.1.g03840.1.sm.mkhc length: 316 aa.
IPR021863 Protein of unknown function DUF3474
method AccNumber shortName E-value location
Molecular Function GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF11960 DUF3474 3.3e-36 38-133
no_ID  
HMMPanther PTHR32100 FAMILY 1.4e-108 58-312
HMMPanther PTHR32100:SF0 SUBFAMILY 1.4e-108 58-312
Seg seg seg NA 68-87
121-139
Pseudomolecule
Chromosome Start End Strand
21302257813027728+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00003.1 maker exon 1865815 1865918 . + . ID=Zjn_sc00003.1.g03840.1.sm.mkhc:exon:1
Zjn_sc00003.1 maker exon 1868402 1868791 . + . ID=Zjn_sc00003.1.g03840.1.sm.mkhc:exon:2
Zjn_sc00003.1 maker exon 1869080 1869146 . + . ID=Zjn_sc00003.1.g03840.1.sm.mkhc:exon:3
Zjn_sc00003.1 maker exon 1869265 1869357 . + . ID=Zjn_sc00003.1.g03840.1.sm.mkhc:exon:4
Zjn_sc00003.1 maker exon 1869752 1869832 . + . ID=Zjn_sc00003.1.g03840.1.sm.mkhc:exon:5
Zjn_sc00003.1 maker exon 1870490 1870576 . + . ID=Zjn_sc00003.1.g03840.1.sm.mkhc:exon:6
Zjn_sc00003.1 maker exon 1870726 1870839 . + . ID=Zjn_sc00003.1.g03840.1.sm.mkhc:exon:7
Zjn_sc00003.1 maker exon 1870951 1870965 . + . ID=Zjn_sc00003.1.g03840.1.sm.mkhc:exon:8

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