Z. japonica Nagirizaki
Zjn_sc00003.1.g03790.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G47340.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 606 1 545 0.0 96.4 66.8 76.9
Subject 584 1 544
Annot | Symbols: ASN1, DIN6, AT-ASN1 | glutamine-dependent asparagine synthase 1 | chr3:17438136-17441043 REVERSE LENGTH=584
NR ref|XP_006651276.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 606 1 599 0.0 106.9 87 92.2
Subject 648 49 647
Annot PREDICTED: asparagine synthetase [glutamine-hydrolyzing] 1-like [Oryza brachyantha]
IRGSP Os03t0291500-01_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 606 1 599 0.0 99.7 84.8 90.6
Subject 604 1 603
Annot
Sbicolor Sobic.001G406800.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 606 1 606 0.0 97.4 88.3 92.2
Subject 590 1 590
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00003.1.g03790.1.sm.mkhc length: 606 aa.
IPR000583 Class II glutamine amidotransferase domain
method AccNumber shortName E-value location
Biological Process GO:0008152 metabolic process    
HMMPfam PF13537 GATase_7 1.3e-38 49-166
IPR001962 Asparagine synthase
Molecular Function GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity    
Biological Process GO:0006529 asparagine biosynthetic process    
HMMPfam PF00733 Asn_synthase 2.5e-69 211-451
IPR014729 Rossmann-like alpha/beta/alpha sandwich fold
Gene3D G3DSA:3.40.50.620 no description 4.9e-113 192-511
IPR017932 Glutamine amidotransferase type 2 domain
ProfileScan PS51278 GATASE_TYPE_2 33.592 2-186
no_ID  
Gene3D G3DSA:3.60.20.10 no description 1.4e-58 2-191
HMMPanther PTHR11772 ASPARAGINE 9.2e-215 2-513
Seg seg seg NA 230-245
341-355
556-593
superfamily SSF52402 Adenine 5.9e-82 189-524
superfamily SSF56235 N-terminal 9e-63 1-196
Pseudomolecule
Chromosome Start End Strand
21299604113000040+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00003.1 maker exon 1839278 1839441 . + . ID=Zjn_sc00003.1.g03790.1.sm.mkhc:exon:1
Zjn_sc00003.1 maker exon 1839918 1840056 . + . ID=Zjn_sc00003.1.g03790.1.sm.mkhc:exon:2
Zjn_sc00003.1 maker exon 1840166 1840264 . + . ID=Zjn_sc00003.1.g03790.1.sm.mkhc:exon:3
Zjn_sc00003.1 maker exon 1840350 1840491 . + . ID=Zjn_sc00003.1.g03790.1.sm.mkhc:exon:4
Zjn_sc00003.1 maker exon 1840719 1840909 . + . ID=Zjn_sc00003.1.g03790.1.sm.mkhc:exon:5
Zjn_sc00003.1 maker exon 1841030 1841191 . + . ID=Zjn_sc00003.1.g03790.1.sm.mkhc:exon:6
Zjn_sc00003.1 maker exon 1841270 1841350 . + . ID=Zjn_sc00003.1.g03790.1.sm.mkhc:exon:7
Zjn_sc00003.1 maker exon 1841577 1841798 . + . ID=Zjn_sc00003.1.g03790.1.sm.mkhc:exon:8
Zjn_sc00003.1 maker exon 1841906 1842040 . + . ID=Zjn_sc00003.1.g03790.1.sm.mkhc:exon:9
Zjn_sc00003.1 maker exon 1842129 1842209 . + . ID=Zjn_sc00003.1.g03790.1.sm.mkhc:exon:10
Zjn_sc00003.1 maker exon 1842310 1842504 . + . ID=Zjn_sc00003.1.g03790.1.sm.mkhc:exon:11
Zjn_sc00003.1 maker exon 1842631 1843277 . + . ID=Zjn_sc00003.1.g03790.1.sm.mkhc:exon:12

Top