Z. japonica Nagirizaki
Zjn_sc00003.1.g03340.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G33680.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 230 69 230 1e-64 200.4 57.4 66.5
Subject 461 265 461
Annot | Symbols: AGD2 | Pyridoxal phosphate (PLP)-dependent transferases superfamily protein | chr4:16171847-16174630 REVERSE LENGTH=461
NR gb|EMT19603.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 230 69 230 2e-74 129.6 62.6 67
Subject 298 102 298
Annot LL-diaminopimelate aminotransferase, chloroplastic [Aegilops tauschii]
IRGSP Os03t0299900-01_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 230 69 230 8e-72 201.7 65.2 68.7
Subject 464 268 464
Annot
Sbicolor Sobic.001G401700.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 230 69 230 2e-74 200.9 66.5 69.1
Subject 462 266 462
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00003.1.g03340.1.sm.mk length: 230 aa.
IPR004839 Aminotransferase, class I/classII
method AccNumber shortName E-value location
Biological Process GO:0009058 biosynthetic process    
Molecular Function GO:0030170 pyridoxal phosphate binding    
HMMPfam PF00155 Aminotran_1_2 1.8e-06 134-224
IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.40.640.10 no description 2.7e-09 85-137
IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.90.1150.10 no description 7e-21 138-229
IPR015424 Pyridoxal phosphate-dependent transferase
superfamily SSF53383 PLP-dependent 6.8e-30 79-230
IPR019942 Diaminopimelate aminotransferase, DapL, plant/Chlamydia-type
Biological Process GO:0009089 lysine biosynthetic process via diaminopimelate    
Molecular Function GO:0010285 L,L-diaminopimelate aminotransferase activity    
HMMPanther PTHR11751:SF22 AMINOTRANSFERASE 5.3e-79 76-230
no_ID  
HMMPanther PTHR11751 SUBGROUP 5.3e-79 76-230
Seg seg seg NA 2-13
14-29
195-206
Pseudomolecule
Chromosome Start End Strand
21279203712795462-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00003.1 maker_non_over exon 1635274 1635567 . - . ID=Zjn_sc00003.1.g03340.1.sm.mk:exon:7
Zjn_sc00003.1 maker_non_over exon 1635806 1635934 . - . ID=Zjn_sc00003.1.g03340.1.sm.mk:exon:6
Zjn_sc00003.1 maker_non_over exon 1636096 1636139 . - . ID=Zjn_sc00003.1.g03340.1.sm.mk:exon:5
Zjn_sc00003.1 maker_non_over exon 1637614 1637651 . - . ID=Zjn_sc00003.1.g03340.1.sm.mk:exon:4
Zjn_sc00003.1 maker_non_over exon 1638078 1638144 . - . ID=Zjn_sc00003.1.g03340.1.sm.mk:exon:3
Zjn_sc00003.1 maker_non_over exon 1638483 1638514 . - . ID=Zjn_sc00003.1.g03340.1.sm.mk:exon:2
Zjn_sc00003.1 maker_non_over exon 1638611 1638699 . - . ID=Zjn_sc00003.1.g03340.1.sm.mk:exon:1

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