Z. japonica Nagirizaki
Zjn_sc00003.1.g01950.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G20770.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 534 24 518 e-143 117.6 52.6 64.4
Subject 628 6 488
Annot | Symbols: EIN3, AtEIN3 | Ethylene insensitive 3 family protein | chr3:7260702-7262588 REVERSE LENGTH=628
NR ref|XP_004984528.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 534 1 529 0.0 121.2 88 92.7
Subject 647 12 542
Annot PREDICTED: ETHYLENE INSENSITIVE 3-like 1 protein [Setaria italica]
IRGSP Os03t0324200-01_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 534 1 529 0.0 120.6 85 90.1
Subject 644 12 535
Annot
Sbicolor Sobic.001G387600.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 534 1 529 0.0 120.4 87.5 92.3
Subject 643 12 541
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00003.1.g01950.1.sm.mk length: 534 aa.
IPR023278 Ethylene insensitive 3-like protein, DNA-binding domain
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Cellular Component GO:0005634 nucleus    
Gene3D G3DSA:1.10.3180.10 no description 3.4e-73 200-334
superfamily SSF116768 DNA-binding 7e-63 204-331
no_ID  
Coil coil coiled-coil NA 69-90
HMMPanther PTHR31820 FAMILY 4.6e-237 17-520
HMMPanther PTHR31820:SF0 SUBFAMILY 4.6e-237 17-520
HMMPfam PF04873 EIN3 1.2e-152 70-458
Seg seg seg NA 56-73
99-108
193-204
345-356
474-479
Pseudomolecule
Chromosome Start End Strand
21222259012224991-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00003.1 maker_non_over exon 1065827 1065847 . - . ID=Zjn_sc00003.1.g01950.1.sm.mk:exon:2
Zjn_sc00003.1 maker_non_over exon 1066645 1068228 . - . ID=Zjn_sc00003.1.g01950.1.sm.mk:exon:1

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