Z. japonica Nagirizaki
Zjn_sc00003.1.g00980.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G50950.2 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 387 35 386 e-164 128.9 78.3 83.7
Subject 499 33 499
Annot | Symbols: FUM2 | FUMARASE 2 | chr5:20729687-20733636 FORWARD LENGTH=499
NR ref|XP_003557953.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 387 1 386 0.0 127.6 92 94.3
Subject 494 1 494
Annot PREDICTED: fumarate hydratase 1, mitochondrial-like [Brachypodium distachyon]
IRGSP Os03t0337900-01_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 387 36 386 e-174 129.7 85.5 87.9
Subject 502 37 502
Annot
Sbicolor Sobic.001G378800.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 387 1 386 e-178 128.7 92 94.6
Subject 498 1 498
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00003.1.g00980.1.sm.mkhc length: 387 aa.
IPR008948 L-Aspartase-like
method AccNumber shortName E-value location
Molecular Function GO:0003824 catalytic activity    
superfamily SSF48557 L-aspartase-like 2.1e-99 40-382
IPR018951 Fumarase C, C-terminal
Biological Process GO:0006099 tricarboxylic acid cycle    
Molecular Function GO:0016829 lyase activity    
HMMPfam PF10415 FumaraseC_C 6.1e-19 334-384
IPR022761 Fumarate lyase, N-terminal
HMMPfam PF00206 Lyase_1 5.1e-10 49-233
231-287
IPR024083 Fumarase/histidase, N-terminal
Gene3D G3DSA:1.10.275.10 no description 1.1e-59 40-170
no_ID  
Gene3D G3DSA:1.10.40.30 no description 1.4e-22 335-385
Gene3D G3DSA:1.20.200.10 no description 3.4e-15 171-287
288-334
HMMPanther PTHR11444 ASPARTATEAMMONIA/ARGININOSUCCINATE/ADENYLOSUCCINATE 3.2e-186 39-387
HMMPanther PTHR11444:SF1 ASPARTATE 3.2e-186 39-387
Seg seg seg NA 8-28
Pseudomolecule
Chromosome Start End Strand
21170395111709470-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00003.1 maker exon 547188 547623 . - . ID=Zjn_sc00003.1.g00980.1.sm.mkhc:exon:13
Zjn_sc00003.1 maker exon 547961 548026 . - . ID=Zjn_sc00003.1.g00980.1.sm.mkhc:exon:12
Zjn_sc00003.1 maker exon 548497 548592 . - . ID=Zjn_sc00003.1.g00980.1.sm.mkhc:exon:11
Zjn_sc00003.1 maker exon 548886 548936 . - . ID=Zjn_sc00003.1.g00980.1.sm.mkhc:exon:10
Zjn_sc00003.1 maker exon 549266 549301 . - . ID=Zjn_sc00003.1.g00980.1.sm.mkhc:exon:9
Zjn_sc00003.1 maker exon 549501 549582 . - . ID=Zjn_sc00003.1.g00980.1.sm.mkhc:exon:8
Zjn_sc00003.1 maker exon 549973 550022 . - . ID=Zjn_sc00003.1.g00980.1.sm.mkhc:exon:7
Zjn_sc00003.1 maker exon 550234 550332 . - . ID=Zjn_sc00003.1.g00980.1.sm.mkhc:exon:6
Zjn_sc00003.1 maker exon 551148 551231 . - . ID=Zjn_sc00003.1.g00980.1.sm.mkhc:exon:5
Zjn_sc00003.1 maker exon 551352 551423 . - . ID=Zjn_sc00003.1.g00980.1.sm.mkhc:exon:4
Zjn_sc00003.1 maker exon 551729 551878 . - . ID=Zjn_sc00003.1.g00980.1.sm.mkhc:exon:3
Zjn_sc00003.1 maker exon 552264 552381 . - . ID=Zjn_sc00003.1.g00980.1.sm.mkhc:exon:2
Zjn_sc00003.1 maker exon 552538 552707 . - . ID=Zjn_sc00003.1.g00980.1.sm.mkhc:exon:1

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