Z. japonica Nagirizaki
Zjn_sc00003.1.g00910.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G02280.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 782 1 779 0.0 103.5 77.7 89.6
Subject 809 1 808
Annot | Symbols: SUS3, ATSUS3 | sucrose synthase 3 | chr4:995166-998719 FORWARD LENGTH=809
NR ref|XP_004984440.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 782 1 782 0.0 103.5 94.1 97.6
Subject 809 1 809
Annot PREDICTED: sucrose synthase 4 [Setaria italica]
IRGSP Os03t0340500-01_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 782 1 779 0.0 103.5 92.2 96.4
Subject 809 1 806
Annot
Sbicolor Sobic.001G378300.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 782 1 782 0.0 103.5 93.4 97.4
Subject 809 1 809
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00003.1.g00910.1.sm.mkhc length: 782 aa.
IPR000368 Sucrose synthase
method AccNumber shortName E-value location
Biological Process GO:0005985 sucrose metabolic process    
HMMPfam PF00862 Sucrose_synth 1.3e-238 8-126
131-526
IPR001296 Glycosyl transferase, family 1
Biological Process GO:0009058 biosynthetic process    
HMMPfam PF00534 Glycos_transf_1 1.6e-30 531-703
IPR012820 Sucrose synthase, plant/cyanobacteria
Biological Process GO:0005985 sucrose metabolic process    
Molecular Function GO:0016157 sucrose synthase activity    
HMMPanther PTHR12526:SF27 SUCROSE 0 133-771
HMMTigr TIGR02470 sucr_synth: 0 131-776
no_ID  
Coil coil coiled-coil NA 13-34
Gene3D G3DSA:3.40.50.2000 no description 3.9e-20 534-719
HMMPanther PTHR12526 GLYCOSYLTRANSFERASE 0 133-771
superfamily SSF53756 UDP-Glycosyltransferase/glycogen 4.8e-52 270-737
Pseudomolecule
Chromosome Start End Strand
21167430611679734+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00003.1 maker exon 517543 517640 . + . ID=Zjn_sc00003.1.g00910.1.sm.mkhc:exon:1
Zjn_sc00003.1 maker exon 517767 517893 . + . ID=Zjn_sc00003.1.g00910.1.sm.mkhc:exon:2
Zjn_sc00003.1 maker exon 517991 518142 . + . ID=Zjn_sc00003.1.g00910.1.sm.mkhc:exon:3
Zjn_sc00003.1 maker exon 518826 518841 . + . ID=Zjn_sc00003.1.g00910.1.sm.mkhc:exon:4
Zjn_sc00003.1 maker exon 518870 518965 . + . ID=Zjn_sc00003.1.g00910.1.sm.mkhc:exon:5
Zjn_sc00003.1 maker exon 519056 519174 . + . ID=Zjn_sc00003.1.g00910.1.sm.mkhc:exon:6
Zjn_sc00003.1 maker exon 519627 519843 . + . ID=Zjn_sc00003.1.g00910.1.sm.mkhc:exon:7
Zjn_sc00003.1 maker exon 519917 520012 . + . ID=Zjn_sc00003.1.g00910.1.sm.mkhc:exon:8
Zjn_sc00003.1 maker exon 520120 520293 . + . ID=Zjn_sc00003.1.g00910.1.sm.mkhc:exon:9
Zjn_sc00003.1 maker exon 520567 520683 . + . ID=Zjn_sc00003.1.g00910.1.sm.mkhc:exon:10
Zjn_sc00003.1 maker exon 520756 520922 . + . ID=Zjn_sc00003.1.g00910.1.sm.mkhc:exon:11
Zjn_sc00003.1 maker exon 521215 521439 . + . ID=Zjn_sc00003.1.g00910.1.sm.mkhc:exon:12
Zjn_sc00003.1 maker exon 521680 522001 . + . ID=Zjn_sc00003.1.g00910.1.sm.mkhc:exon:13
Zjn_sc00003.1 maker exon 522080 522324 . + . ID=Zjn_sc00003.1.g00910.1.sm.mkhc:exon:14
Zjn_sc00003.1 maker exon 522417 522555 . + . ID=Zjn_sc00003.1.g00910.1.sm.mkhc:exon:15
Zjn_sc00003.1 maker exon 522701 522971 . + . ID=Zjn_sc00003.1.g00910.1.sm.mkhc:exon:16

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