Z. japonica Nagirizaki
Zjn_sc00003.1.g00160.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G23960.2 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 515 25 515 4e-62 105.8 32 54
Subject 545 9 545
Annot | Symbols: TPS21 | terpene synthase 21 | chr5:8092969-8095128 FORWARD LENGTH=545
NR ref|XP_002465234.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 515 70 515 e-175 99.2 64.9 73.4
Subject 511 3 511
Annot hypothetical protein SORBIDRAFT_01g034700 [Sorghum bicolor] gi|241919088|gb|EER92232.1| hypothetical protein SORBIDRAFT_01g034700 [Sorghum bicolor]
IRGSP Os03t0362500-00_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 515 57 510 e-140 102.9 55.7 68.9
Subject 530 8 522
Annot
Sbicolor Sobic.001G363400.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 515 8 511 0.0 112.6 70.1 79.2
Subject 580 11 575
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00003.1.g00160.1.am.mk length: 515 aa.
IPR001906 Terpene synthase, N-terminal domain
method AccNumber shortName E-value location
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0010333 terpene synthase activity    
Molecular Function GO:0016829 lyase activity    
Gene3D G3DSA:1.50.30.10 no description 1.4e-64 54-258
HMMPfam PF01397 Terpene_synth 2.2e-50 33-218
IPR005630 Terpene synthase, metal-binding domain
Molecular Function GO:0000287 magnesium ion binding    
Molecular Function GO:0010333 terpene synthase activity    
Molecular Function GO:0016829 lyase activity    
HMMPfam PF03936 Terpene_synth_C 2.3e-30 249-301
296-458
IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid
superfamily SSF48239 Terpenoid 7.8e-62 29-244
IPR008949 Terpenoid synthase
Gene3D G3DSA:1.10.600.10 no description 1.6e-61 259-298
299-514
superfamily SSF48576 Terpenoid 4.1e-65 244-514
no_ID  
Coil coil coiled-coil NA 45-73
HMMPanther PTHR31225 FAMILY 5e-85 19-515
Seg seg seg NA 440-455
Pseudomolecule
Chromosome Start End Strand
21124275611244957+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00003.1 maker_non_over exon 85993 86130 . + . ID=Zjn_sc00003.1.g00160.1.am.mk:exon:1
Zjn_sc00003.1 maker_non_over exon 86302 86978 . + . ID=Zjn_sc00003.1.g00160.1.am.mk:exon:2
Zjn_sc00003.1 maker_non_over exon 87090 87172 . + . ID=Zjn_sc00003.1.g00160.1.am.mk:exon:3
Zjn_sc00003.1 maker_non_over exon 87441 87544 . + . ID=Zjn_sc00003.1.g00160.1.am.mk:exon:4
Zjn_sc00003.1 maker_non_over exon 87649 88194 . + . ID=Zjn_sc00003.1.g00160.1.am.mk:exon:5

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