Z. japonica Nagirizaki
Zjn_sc00003.1.g00150.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G23960.2 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 257 25 254 2e-27 212.1 31.9 49
Subject 545 9 234
Annot | Symbols: TPS21 | terpene synthase 21 | chr5:8092969-8095128 FORWARD LENGTH=545
NR ref|XP_004979711.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 257 26 254 2e-76 213.6 57.6 70.4
Subject 549 15 238
Annot PREDICTED: (S)-beta-bisabolene synthase-like [Setaria italica]
IRGSP Os03t0361700-00_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 257 47 254 7e-60 201.9 48.2 60.3
Subject 519 1 207
Annot
Sbicolor Sobic.001G363400.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 257 8 254 9e-80 225.7 60.7 68.9
Subject 580 11 268
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00003.1.g00150.1.sm.mk length: 257 aa.
IPR001906 Terpene synthase, N-terminal domain
method AccNumber shortName E-value location
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0010333 terpene synthase activity    
Molecular Function GO:0016829 lyase activity    
Gene3D G3DSA:1.50.30.10 no description 3.9e-59 51-253
HMMPfam PF01397 Terpene_synth 4.5e-45 33-213
IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid
superfamily SSF48239 Terpenoid 4.1e-55 29-239
no_ID  
Coil coil coiled-coil NA 49-70
HMMPanther PTHR31225 FAMILY 2.2e-40 19-254
Pseudomolecule
Chromosome Start End Strand
21122749311237107+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00003.1 maker_non_over exon 70730 70867 . + . ID=Zjn_sc00003.1.g00150.1.sm.mk:exon:1
Zjn_sc00003.1 maker_non_over exon 71048 71152 . + . ID=Zjn_sc00003.1.g00150.1.sm.mk:exon:2
Zjn_sc00003.1 maker_non_over exon 71157 71677 . + . ID=Zjn_sc00003.1.g00150.1.sm.mk:exon:3
Zjn_sc00003.1 maker_non_over exon 80335 80344 . + . ID=Zjn_sc00003.1.g00150.1.sm.mk:exon:4

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