Z. japonica Nagirizaki
Zjn_sc00002.1.g17400.1.sm.mkhc
Sequence
-
BLAST
| TAIR10 |
AT5G65780.1 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
199 |
90 |
198 |
3e-43 |
208.5 |
42.2 |
46.2 |
| Subject |
415 |
307 |
415 |
|
| Annot |
| Symbols: ATBCAT-5 | branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5) | chr5:26316418-26318585 FORWARD LENGTH=415 |
| NR |
gb|KCW54716.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
199 |
2 |
197 |
1e-58 |
188.4 |
63.3 |
75.9 |
| Subject |
375 |
163 |
374 |
|
| Annot |
hypothetical protein EUGRSUZ_I00664 [Eucalyptus grandis] |
| IRGSP |
Os03t0106400-01_chr03_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
199 |
90 |
199 |
5e-48 |
203.5 |
46.2 |
50.3 |
| Subject |
405 |
296 |
405 |
|
| Annot |
|
| Sbicolor |
Sobic.001G540100.2.p|Chr01|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
199 |
90 |
199 |
2e-52 |
202.5 |
50.3 |
52.3 |
| Subject |
403 |
294 |
403 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00002.1.g17400.1.sm.mkhc |
length: 199 aa. |
| IPR001544 |
Aminotransferase, class IV |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Biological Process |
GO:0008152 |
metabolic process |
|
|
| HMMPanther |
PTHR11825 |
SUBGROUP |
1.5e-45 |
39-198 |
| HMMPfam |
PF01063 |
Aminotran_4 |
1.7e-16 |
88-175 |
| superfamily |
SSF56752 |
D-aminoacid |
5.9e-35 |
51-199 |
| IPR005786 |
Branched-chain amino acid aminotransferase II |
| Molecular Function |
GO:0004084 |
branched-chain-amino-acid transaminase activity |
|
|
| Biological Process |
GO:0009081 |
branched-chain amino acid metabolic process |
|
|
| HMMPanther |
PTHR11825:SF2 |
BRANCHED-CHAIN |
1.5e-45 |
39-198 |
| no_ID |
|
| Gene3D |
G3DSA:3.20.10.10 |
no description |
2.1e-29 |
92-185 |
| Gene3D |
G3DSA:3.30.470.10 |
no description |
1.7e-14 |
46-91 |
| Seg |
seg |
seg |
NA |
59-74 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 1 | 18858429 | 18863111 | +
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00002.1 |
maker |
exon |
7924491 |
7924699 |
. |
+ |
. |
ID=Zjn_sc00002.1.g17400.1.sm.mkhc:exon:1 |
| Zjn_sc00002.1 |
maker |
exon |
7926050 |
7926072 |
. |
+ |
. |
ID=Zjn_sc00002.1.g17400.1.sm.mkhc:exon:2 |
| Zjn_sc00002.1 |
maker |
exon |
7926279 |
7926351 |
. |
+ |
. |
ID=Zjn_sc00002.1.g17400.1.sm.mkhc:exon:3 |
| Zjn_sc00002.1 |
maker |
exon |
7926848 |
7926979 |
. |
+ |
. |
ID=Zjn_sc00002.1.g17400.1.sm.mkhc:exon:4 |
| Zjn_sc00002.1 |
maker |
exon |
7928005 |
7928100 |
. |
+ |
. |
ID=Zjn_sc00002.1.g17400.1.sm.mkhc:exon:5 |
| Zjn_sc00002.1 |
maker |
exon |
7928395 |
7928507 |
. |
+ |
. |
ID=Zjn_sc00002.1.g17400.1.sm.mkhc:exon:6 |
| Zjn_sc00002.1 |
maker |
exon |
7928788 |
7929173 |
. |
+ |
. |
ID=Zjn_sc00002.1.g17400.1.sm.mkhc:exon:7 |