Z. japonica Nagirizaki
Zjn_sc00002.1.g16750.1.sm.mkhc
Sequence
-
BLAST
| TAIR10 |
AT3G48750.1 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
225 |
1 |
221 |
1e-74 |
130.7 |
70.7 |
80 |
| Subject |
294 |
1 |
290 |
|
| Annot |
| Symbols: CDKA;1, CDC2AAT, CDK2, CDC2, CDC2A, CDKA1 | cell division control 2 | chr3:18072238-18074296 FORWARD LENGTH=294 |
| NR |
ref|NP_001105342.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
225 |
1 |
225 |
4e-90 |
130.7 |
82.7 |
88.9 |
| Subject |
294 |
1 |
294 |
|
| Annot |
cell division control protein 2 homolog [Zea mays] gi|115923|sp|P23111.1|CDC2_MAIZE RecName: Full=Cell division control protein 2 homolog; AltName: Full=p34cdc2 gi|168511|gb|AAA33479.1| protein cdc2 kinase [Zea mays] gi|195624364|gb|ACG34012.1| cell division control protein 2 [Zea mays] gi|219886431|gb|ACL53590.1| unknown [Zea mays] gi|414864400|tpg|DAA42957.1| TPA: putative cyclin-dependent kinase A family protein [Zea mays] |
| IRGSP |
Os02t0123100-03_chr02_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
225 |
1 |
223 |
1e-72 |
129.8 |
68.9 |
79.6 |
| Subject |
292 |
1 |
291 |
|
| Annot |
|
| Sbicolor |
Sobic.001G530600.1.p|Chr01|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
225 |
1 |
225 |
5e-89 |
130.7 |
79.6 |
88.4 |
| Subject |
294 |
1 |
294 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00002.1.g16750.1.sm.mkhc |
length: 225 aa. |
| IPR000719 |
Protein kinase domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0004672 |
protein kinase activity |
|
|
| Molecular Function |
GO:0005524 |
ATP binding |
|
|
| Biological Process |
GO:0006468 |
protein phosphorylation |
|
|
| HMMPfam |
PF00069 |
Pkinase |
5.6e-22 |
4-92 |
| ProfileScan |
PS50011 |
PROTEIN_KINASE_DOM |
15.340 |
4-225 |
| IPR002290 |
Serine/threonine- / dual specificity protein kinase, catalytic domain |
| Molecular Function |
GO:0004672 |
protein kinase activity |
|
|
| Molecular Function |
GO:0005524 |
ATP binding |
|
|
| Biological Process |
GO:0006468 |
protein phosphorylation |
|
|
| HMMSmart |
SM00220 |
Serine/Threonine |
2.4e-19 |
4-218 |
| IPR011009 |
Protein kinase-like domain |
| Molecular Function |
GO:0016772 |
transferase activity, transferring phosphorus-containing groups |
|
|
| superfamily |
SSF56112 |
Protein |
9.9e-36 |
1-220 |
| IPR017441 |
Protein kinase, ATP binding site |
| Molecular Function |
GO:0005524 |
ATP binding |
|
|
| PatternScan |
PS00107 |
PROTEIN_KINASE_ATP |
NA |
10-33 |
| IPR020635 |
Tyrosine-protein kinase, catalytic domain |
| Molecular Function |
GO:0004713 |
protein tyrosine kinase activity |
|
|
| Biological Process |
GO:0006468 |
protein phosphorylation |
|
|
| HMMSmart |
SM00219 |
Tyrosine |
3.9e-05 |
4-218 |
| no_ID |
|
| Gene3D |
G3DSA:1.10.510.10 |
no description |
0.00033 |
195-221 |
| Gene3D |
G3DSA:3.30.200.20 |
no description |
4.5e-31 |
2-94 |
| HMMPanther |
PTHR24056 |
CELL |
2.6e-79 |
1-221 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 1 | 18583376 | 18585998 | -
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00002.1 |
maker |
exon |
7649438 |
7649736 |
. |
- |
. |
ID=Zjn_sc00002.1.g16750.1.sm.mkhc:exon:7 |
| Zjn_sc00002.1 |
maker |
exon |
7649988 |
7650075 |
. |
- |
. |
ID=Zjn_sc00002.1.g16750.1.sm.mkhc:exon:6 |
| Zjn_sc00002.1 |
maker |
exon |
7650198 |
7650304 |
. |
- |
. |
ID=Zjn_sc00002.1.g16750.1.sm.mkhc:exon:5 |
| Zjn_sc00002.1 |
maker |
exon |
7650511 |
7650588 |
. |
- |
. |
ID=Zjn_sc00002.1.g16750.1.sm.mkhc:exon:4 |
| Zjn_sc00002.1 |
maker |
exon |
7651272 |
7651392 |
. |
- |
. |
ID=Zjn_sc00002.1.g16750.1.sm.mkhc:exon:3 |
| Zjn_sc00002.1 |
maker |
exon |
7651642 |
7651826 |
. |
- |
. |
ID=Zjn_sc00002.1.g16750.1.sm.mkhc:exon:2 |
| Zjn_sc00002.1 |
maker |
exon |
7651910 |
7652060 |
. |
- |
. |
ID=Zjn_sc00002.1.g16750.1.sm.mkhc:exon:1 |