Z. japonica Nagirizaki
Zjn_sc00002.1.g15420.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G17120.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 352 15 302 9e-51 99.4 31.8 46.6
Subject 350 14 305
Annot | Symbols: LYM2 | lysm domain GPI-anchored protein 2 precursor | chr2:7459156-7460648 FORWARD LENGTH=350
NR ref|XP_004985819.2| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 352 1 352 e-114 233.8 67.6 80.1
Subject 823 469 823
Annot PREDICTED: uncharacterized protein LOC101771225 [Setaria italica]
IRGSP Os03t0133400-01_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 352 28 352 e-116 101.1 60.5 73.9
Subject 356 30 356
Annot
Sbicolor Sobic.001G515500.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 352 25 352 e-102 99.4 58 67.3
Subject 350 26 350
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00002.1.g15420.1.sm.mkhc length: 352 aa.
IPR018392 Peptidoglycan-binding lysin domain
method AccNumber shortName E-value location
Biological Process GO:0016998 cell wall macromolecule catabolic process    
HMMPfam PF01476 LysM 1.9e-07 109-155
173-216
HMMSmart SM00257 Lysin 1.2e-08 108-155
172-216
no_ID  
Gene3D G3DSA:3.10.350.10 no description 2.1e-09 108-155
173-216
Seg seg seg NA 2-37
73-89
superfamily SSF54106 LysM 3.8e-07 170-218
106-157
Pseudomolecule
Chromosome Start End Strand
11801717918019840-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00002.1 maker exon 7083241 7083893 . - . ID=Zjn_sc00002.1.g15420.1.sm.mkhc:exon:4
Zjn_sc00002.1 maker exon 7084004 7084194 . - . ID=Zjn_sc00002.1.g15420.1.sm.mkhc:exon:3
Zjn_sc00002.1 maker exon 7084290 7084407 . - . ID=Zjn_sc00002.1.g15420.1.sm.mkhc:exon:2
Zjn_sc00002.1 maker exon 7085248 7085902 . - . ID=Zjn_sc00002.1.g15420.1.sm.mkhc:exon:1

Top