Z. japonica Nagirizaki
Zjn_sc00002.1.g15400.1.sm.mkhc
Sequence
-
BLAST
| TAIR10 |
AT2G17640.1 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
157 |
100 |
155 |
8e-20 |
205.7 |
28.7 |
31.8 |
| Subject |
323 |
205 |
260 |
|
| Annot |
| Symbols: ATSERAT3;1, SAT-106 | Trimeric LpxA-like enzymes superfamily protein | chr2:7668238-7670226 REVERSE LENGTH=323 |
| NR |
ref|XP_006649347.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
157 |
1 |
89 |
2e-28 |
222.3 |
40.1 |
45.2 |
| Subject |
349 |
1 |
89 |
|
| Annot |
PREDICTED: probable serine acetyltransferase 2-like [Oryza brachyantha] |
| IRGSP |
Os03t0133900-01_chr03_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
157 |
96 |
155 |
8e-26 |
225.5 |
35 |
37.6 |
| Subject |
354 |
244 |
304 |
|
| Annot |
|
| Sbicolor |
Sobic.001G514800.1.p|Chr01|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
157 |
96 |
155 |
8e-27 |
216.6 |
35.7 |
37.6 |
| Subject |
340 |
240 |
300 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00002.1.g15400.1.sm.mkhc |
length: 157 aa. |
| IPR001451 |
Bacterial transferase hexapeptide repeat |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF00132 |
Hexapep |
9.4e-08 |
115-148 |
| IPR011004 |
Trimeric LpxA-like |
| superfamily |
SSF51161 |
Trimeric |
5.7e-18 |
97-156 |
| IPR018357 |
Hexapeptide transferase, conserved site |
| Molecular Function |
GO:0016740 |
transferase activity |
|
|
| PatternScan |
PS00101 |
HEXAPEP_TRANSFERASES |
NA |
124-152 |
| no_ID |
|
| Gene3D |
G3DSA:2.160.10.10 |
no description |
5e-17 |
97-155 |
| HMMPanther |
PTHR23416 |
SIALIC |
3.1e-35 |
98-155 |
| HMMPanther |
PTHR23416:SF13 |
SUBFAMILY |
3.1e-35 |
98-155 |
| Seg |
seg |
seg |
NA |
10-23 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 1 | 18010221 | 18014754 | +
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00002.1 |
maker |
exon |
7076283 |
7076540 |
. |
+ |
. |
ID=Zjn_sc00002.1.g15400.1.sm.mkhc:exon:1 |
| Zjn_sc00002.1 |
maker |
exon |
7078560 |
7078601 |
. |
+ |
. |
ID=Zjn_sc00002.1.g15400.1.sm.mkhc:exon:2 |
| Zjn_sc00002.1 |
maker |
exon |
7079035 |
7079201 |
. |
+ |
. |
ID=Zjn_sc00002.1.g15400.1.sm.mkhc:exon:3 |
| Zjn_sc00002.1 |
maker |
exon |
7080071 |
7080816 |
. |
+ |
. |
ID=Zjn_sc00002.1.g15400.1.sm.mkhc:exon:4 |