Z. japonica Nagirizaki
Zjn_sc00002.1.g15250.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G05710.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 848 14 848 0.0 116.7 80.7 90.2
Subject 990 95 990
Annot | Symbols: ACO3 | aconitase 3 | chr2:2141591-2146350 FORWARD LENGTH=990
NR gb|EMT03129.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 848 14 848 0.0 232 88 93.3
Subject 1967 1070 1966
Annot Putative aconitate hydratase, cytoplasmic [Aegilops tauschii]
IRGSP Os03t0136900-01_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 848 15 848 0.0 116.3 85.7 91.3
Subject 986 91 986
Annot
Sbicolor Sobic.001G512800.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 848 14 848 0.0 116.9 87 92.6
Subject 991 95 991
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00002.1.g15250.1.sm.mkhc length: 848 aa.
IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel
method AccNumber shortName E-value location
Biological Process GO:0008152 metabolic process    
HMMPfam PF00694 Aconitase_C 2.1e-44 647-775
IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha
Biological Process GO:0008152 metabolic process    
FPrintScan PR00415 ACONITASE 4.7e-36 159-172
183-191
212-225
226-241
288-301
302-315
449-462
HMMPfam PF00330 Aconitase 7e-32 74-407
416-518
superfamily SSF53732 Aconitase 1.1e-217 18-584
IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel
Biological Process GO:0008152 metabolic process    
Gene3D G3DSA:3.20.19.10 no description 1.1e-75 594-845
superfamily SSF52016 LeuD/IlvD-like 1.1e-88 585-847
IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3
Biological Process GO:0008152 metabolic process    
Gene3D G3DSA:3.30.499.10 no description 1.1e-42 36-258
411-530
IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2
Biological Process GO:0008152 metabolic process    
Gene3D G3DSA:3.40.1060.10 no description 1.5e-35 259-379
IPR015934 Aconitase/Iron regulatory protein 2/2-methylisocitrate dehydratase
Biological Process GO:0008152 metabolic process    
HMMPanther PTHR11670:SF1 ACONITASE 0 33-848
IPR015937 Aconitase/isopropylmalate dehydratase
Biological Process GO:0008152 metabolic process    
HMMPanther PTHR11670 ACONITASE 0 33-848
IPR018136 Aconitase family, 4Fe-4S cluster binding site
PatternScan PS01244 ACONITASE_2 NA 449-462
no_ID  
Seg seg seg NA 229-245
Pseudomolecule
Chromosome Start End Strand
11796106217968383+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00002.1 maker exon 7027124 7027160 . + . ID=Zjn_sc00002.1.g15250.1.sm.mkhc:exon:1
Zjn_sc00002.1 maker exon 7027226 7027333 . + . ID=Zjn_sc00002.1.g15250.1.sm.mkhc:exon:2
Zjn_sc00002.1 maker exon 7027768 7027928 . + . ID=Zjn_sc00002.1.g15250.1.sm.mkhc:exon:3
Zjn_sc00002.1 maker exon 7028443 7028535 . + . ID=Zjn_sc00002.1.g15250.1.sm.mkhc:exon:4
Zjn_sc00002.1 maker exon 7029171 7029356 . + . ID=Zjn_sc00002.1.g15250.1.sm.mkhc:exon:5
Zjn_sc00002.1 maker exon 7029456 7029617 . + . ID=Zjn_sc00002.1.g15250.1.sm.mkhc:exon:6
Zjn_sc00002.1 maker exon 7029978 7030122 . + . ID=Zjn_sc00002.1.g15250.1.sm.mkhc:exon:7
Zjn_sc00002.1 maker exon 7030219 7030361 . + . ID=Zjn_sc00002.1.g15250.1.sm.mkhc:exon:8
Zjn_sc00002.1 maker exon 7030439 7030495 . + . ID=Zjn_sc00002.1.g15250.1.sm.mkhc:exon:9
Zjn_sc00002.1 maker exon 7030572 7030651 . + . ID=Zjn_sc00002.1.g15250.1.sm.mkhc:exon:10
Zjn_sc00002.1 maker exon 7030749 7030824 . + . ID=Zjn_sc00002.1.g15250.1.sm.mkhc:exon:11
Zjn_sc00002.1 maker exon 7031395 7031462 . + . ID=Zjn_sc00002.1.g15250.1.sm.mkhc:exon:12
Zjn_sc00002.1 maker exon 7031556 7031674 . + . ID=Zjn_sc00002.1.g15250.1.sm.mkhc:exon:13
Zjn_sc00002.1 maker exon 7031751 7031872 . + . ID=Zjn_sc00002.1.g15250.1.sm.mkhc:exon:14
Zjn_sc00002.1 maker exon 7032245 7032343 . + . ID=Zjn_sc00002.1.g15250.1.sm.mkhc:exon:15
Zjn_sc00002.1 maker exon 7032454 7032933 . + . ID=Zjn_sc00002.1.g15250.1.sm.mkhc:exon:16
Zjn_sc00002.1 maker exon 7033024 7033122 . + . ID=Zjn_sc00002.1.g15250.1.sm.mkhc:exon:17
Zjn_sc00002.1 maker exon 7033216 7033458 . + . ID=Zjn_sc00002.1.g15250.1.sm.mkhc:exon:18
Zjn_sc00002.1 maker exon 7033544 7034445 . + . ID=Zjn_sc00002.1.g15250.1.sm.mkhc:exon:19

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