Zoysia Genome Database

Z. japonica Nagirizaki

Zjn_sc00002.1.g14580.1.am.mk

Sequence

Transcript sequence

Predicted nucleotide sequence (cds)
Predicted translated sequence (pep)

Genome sequence (Zjn_sc00002.1)

BLAST

TAIR10	AT2G20370.1		Length	Start	End	E-value	Length(%)	Iden(%)	Posi(%)
		Query	666	301	663	e-138	92.9	35.6	42
		Subject	619	9	375
		Annot	\| Symbols: KAM1, MUR3 \| Exostosin family protein \| chr2:8792355-8794214 FORWARD LENGTH=619
NR	ref\|XP_008651011.1\|		Length	Start	End	E-value	Length(%)	Iden(%)	Posi(%)
		Query	666	301	664	e-168	90.8	44.7	48.9
		Subject	605	3	370
		Annot	PREDICTED: xyloglucan galactosyltransferase KATAMARI1 homolog [Zea mays] gi\|414591690\|tpg\|DAA42261.1\| TPA: xyloglucan galactosyltransferase KATAMARI 1 [Zea mays] gi\|414864784\|tpg\|DAA43341.1\| TPA: xyloglucan galactosyltransferase KATAMARI 1 [Zea mays]
IRGSP	Os03t0144800-01_chr03_irgsp1_locus		Length	Start	End	E-value	Length(%)	Iden(%)	Posi(%)
		Query	666	301	663	e-159	90.7	41.1	45.3
		Subject	604	6	368
		Annot
Sbicolor	Sobic.001G506300.1.p\|Chr01\|gene		Length	Start	End	E-value	Length(%)	Iden(%)	Posi(%)
		Query	666	301	664	e-172	92.5	45.3	49.1
		Subject	616	3	381
		Annot

InterProScan

A list of protein families, domains and functional sites (searches in InterPro)

IPR004263	Exostosin-like
Zjn_sc00002.1.g14580.1.am.mk				length: 666 aa.
method	AccNumber	shortName	E-value	location
HMMPanther	PTHR11062	EXOSTOSIN	8.2e-79	437-664
HMMPfam	PF03016	Exostosin	2.1e-46	439-664
no_ID
HMMPanther	PTHR11062:SF11	EXOSTOSIN	8.2e-79	437-664
Seg	seg	seg	NA	18-31 130-144 159-170 252-275 281-293 380-399

Pseudomolecule

Chromosome	Start	End	Strand
1	17684966	17688301	-

Coding region

scaffold	source	type	start	end	score	strand	phase	attributes
Zjn_sc00002.1	maker_non_over	exon	6751028	6751038	.	-	.	ID=Zjn_sc00002.1.g14580.1.am.mk:exon:7
Zjn_sc00002.1	maker_non_over	exon	6751188	6752278	.	-	.	ID=Zjn_sc00002.1.g14580.1.am.mk:exon:6
Zjn_sc00002.1	maker_non_over	exon	6752305	6752785	.	-	.	ID=Zjn_sc00002.1.g14580.1.am.mk:exon:5
Zjn_sc00002.1	maker_non_over	exon	6753330	6753478	.	-	.	ID=Zjn_sc00002.1.g14580.1.am.mk:exon:4
Zjn_sc00002.1	maker_non_over	exon	6753558	6753663	.	-	.	ID=Zjn_sc00002.1.g14580.1.am.mk:exon:3
Zjn_sc00002.1	maker_non_over	exon	6753962	6754013	.	-	.	ID=Zjn_sc00002.1.g14580.1.am.mk:exon:2
Zjn_sc00002.1	maker_non_over	exon	6754253	6754363	.	-	.	ID=Zjn_sc00002.1.g14580.1.am.mk:exon:1