Z. japonica Nagirizaki
Zjn_sc00002.1.g13620.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G54660.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 415 55 402 e-128 136.1 61.2 70.1
Subject 565 68 551
Annot | Symbols: GR, EMB2360, ATGR2 | glutathione reductase | chr3:20230356-20233100 REVERSE LENGTH=565
NR ref|XP_002468457.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 415 1 404 e-169 132.5 80.7 88
Subject 550 1 539
Annot hypothetical protein SORBIDRAFT_01g046260 [Sorghum bicolor] gi|241922311|gb|EER95455.1| hypothetical protein SORBIDRAFT_01g046260 [Sorghum bicolor]
IRGSP Os03t0163300-01_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 415 1 404 e-162 133.7 79.3 86.5
Subject 555 1 544
Annot
Sbicolor Sobic.001G495200.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 415 1 404 e-172 132.5 80.7 88
Subject 550 1 539
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00002.1.g13620.1.sm.mkhc length: 415 aa.
IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
method AccNumber shortName E-value location
Biological Process GO:0045454 cell redox homeostasis    
Biological Process GO:0055114 oxidation-reduction process    
Gene3D G3DSA:3.30.390.30 no description 4.5e-10 332-358
359-399
HMMPfam PF02852 Pyr_redox_dim 1.8e-06 358-391
IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site
Molecular Function GO:0016668 oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor    
Biological Process GO:0055114 oxidation-reduction process    
PatternScan PS00076 PYRIDINE_REDOX_1 NA 120-130
IPR013027 FAD-dependent pyridine nucleotide-disulphide oxidoreductase
Biological Process GO:0055114 oxidation-reduction process    
FPrintScan PR00368 FADPNR 4.3e-14 77-96
192-210
229-247
IPR016156 FAD/NAD-linked reductase, dimerisation domain
Molecular Function GO:0016491 oxidoreductase activity    
Molecular Function GO:0050660 flavin adenine dinucleotide binding    
Biological Process GO:0055114 oxidation-reduction process    
superfamily SSF55424 FAD/NAD-linked 1.4e-06 335-358
IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF07992 Pyr_redox_2 1.9e-37 77-307
no_ID  
FPrintScan PR00411 PNDRDTASEI 1.5e-22 76-98
119-134
229-254
Gene3D G3DSA:3.50.50.60 no description 2.2e-18 73-175
266-331
205-265
HMMPanther PTHR22912 DISULFIDE 6.8e-144 62-395
HMMPanther PTHR22912:SF27 GLUTATHIONE 6.8e-144 62-395
Seg seg seg NA 58-72
superfamily SSF51905 FAD/NAD(P)-binding 3.3e-16 72-334
202-415
Pseudomolecule
Chromosome Start End Strand
11721959117224409-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00002.1 maker exon 6285653 6286147 . - . ID=Zjn_sc00002.1.g13620.1.sm.mkhc:exon:8
Zjn_sc00002.1 maker exon 6286741 6286878 . - . ID=Zjn_sc00002.1.g13620.1.sm.mkhc:exon:7
Zjn_sc00002.1 maker exon 6287220 6287283 . - . ID=Zjn_sc00002.1.g13620.1.sm.mkhc:exon:6
Zjn_sc00002.1 maker exon 6287710 6287858 . - . ID=Zjn_sc00002.1.g13620.1.sm.mkhc:exon:5
Zjn_sc00002.1 maker exon 6287948 6288001 . - . ID=Zjn_sc00002.1.g13620.1.sm.mkhc:exon:4
Zjn_sc00002.1 maker exon 6288368 6288646 . - . ID=Zjn_sc00002.1.g13620.1.sm.mkhc:exon:3
Zjn_sc00002.1 maker exon 6288821 6288983 . - . ID=Zjn_sc00002.1.g13620.1.sm.mkhc:exon:2
Zjn_sc00002.1 maker exon 6290107 6290471 . - . ID=Zjn_sc00002.1.g13620.1.sm.mkhc:exon:1

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