Z. japonica Nagirizaki
Zjn_sc00002.1.g13130.1.am.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G47710.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 117 26 117 3e-24 78.6 51.3 65.8
Subject 92 1 91
Annot | Symbols: BNQ3, BHLH161 | BANQUO 3 | chr3:17590729-17591455 FORWARD LENGTH=92
NR ref|XP_002465780.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 117 41 117 8e-32 78.6 62.4 64.1
Subject 92 16 92
Annot hypothetical protein SORBIDRAFT_01g045710 [Sorghum bicolor] gi|241919634|gb|EER92778.1| hypothetical protein SORBIDRAFT_01g045710 [Sorghum bicolor]
IRGSP Os03t0171300-01_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 117 41 117 1e-32 78.6 58.1 63.2
Subject 92 16 92
Annot
Sbicolor Sobic.001G488600.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 117 41 117 5e-35 78.6 62.4 64.1
Subject 92 16 92
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00002.1.g13130.1.am.mkhc length: 117 aa.
IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
method AccNumber shortName E-value location
Molecular Function GO:0046983 protein dimerization activity    
Gene3D G3DSA:4.10.280.10 no description 5.3e-07 29-103
HMMPfam PF00010 HLH 7.2e-05 45-84
ProfileScan PS50888 BHLH 10.626 30-84
superfamily SSF47459 HLH, 3.7e-07 28-117
no_ID  
Coil coil coiled-coil NA 81-102
Seg seg seg NA 27-40
Pseudomolecule
Chromosome Start End Strand
11699759616998464+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00002.1 maker exon 6063658 6063671 . + . ID=Zjn_sc00002.1.g13130.1.am.mkhc:exon:1
Zjn_sc00002.1 maker exon 6063754 6063796 . + . ID=Zjn_sc00002.1.g13130.1.am.mkhc:exon:2
Zjn_sc00002.1 maker exon 6064043 6064186 . + . ID=Zjn_sc00002.1.g13130.1.am.mkhc:exon:3
Zjn_sc00002.1 maker exon 6064358 6064526 . + . ID=Zjn_sc00002.1.g13130.1.am.mkhc:exon:4

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