Z. japonica Nagirizaki
Zjn_sc00002.1.g12350.1.am.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G26540.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 222 18 217 2e-47 144.6 48.6 64.4
Subject 321 65 311
Annot | Symbols: HEMD, UROS, ATUROS, ATDUF3, DUF3 | uroporphyrinogen-III synthase family protein | chr2:11287666-11290224 REVERSE LENGTH=321
NR ref|XP_004985444.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 222 2 218 9e-72 133.3 68.5 81.1
Subject 296 25 288
Annot PREDICTED: uroporphyrinogen-III synthase, chloroplastic-like [Setaria italica]
IRGSP Os03t0186100-01_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 222 10 217 1e-67 136 65.3 73.9
Subject 302 38 293
Annot
Sbicolor Sobic.001G478600.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 222 2 218 8e-74 133.3 68 78.8
Subject 296 25 288
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00002.1.g12350.1.am.mkhc length: 222 aa.
IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase
method AccNumber shortName E-value location
Molecular Function GO:0004852 uroporphyrinogen-III synthase activity    
Biological Process GO:0033014 tetrapyrrole biosynthetic process    
HMMPfam PF02602 HEM4 8.5e-10 149-208
superfamily SSF69618 HemD-like 4.4e-18 17-215
no_ID  
Gene3D G3DSA:3.40.50.10090 no description 3.4e-07 47-93
135-215
HMMPanther PTHR21091 METHYLTETRAHYDROFOLATE:HOMOCYSTEINE 1.5e-17 136-215
HMMPanther PTHR21091:SF25 UROPORPHYRINOGEN 1.5e-17 136-215
Seg seg seg NA 145-158
Pseudomolecule
Chromosome Start End Strand
11669147816700557-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00002.1 maker exon 5757540 5763686 . - . ID=Zjn_sc00002.1.g12350.1.am.mkhc:exon:8
Zjn_sc00002.1 maker exon 5763782 5763821 . - . ID=Zjn_sc00002.1.g12350.1.am.mkhc:exon:7
Zjn_sc00002.1 maker exon 5763984 5764118 . - . ID=Zjn_sc00002.1.g12350.1.am.mkhc:exon:6
Zjn_sc00002.1 maker exon 5764406 5764491 . - . ID=Zjn_sc00002.1.g12350.1.am.mkhc:exon:5
Zjn_sc00002.1 maker exon 5764944 5765002 . - . ID=Zjn_sc00002.1.g12350.1.am.mkhc:exon:4
Zjn_sc00002.1 maker exon 5765270 5765388 . - . ID=Zjn_sc00002.1.g12350.1.am.mkhc:exon:3
Zjn_sc00002.1 maker exon 5765618 5765684 . - . ID=Zjn_sc00002.1.g12350.1.am.mkhc:exon:2
Zjn_sc00002.1 maker exon 5766472 5766619 . - . ID=Zjn_sc00002.1.g12350.1.am.mkhc:exon:1

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