Z. japonica Nagirizaki
Zjn_sc00002.1.g11050.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G67470.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 619 282 534 2e-87 145.2 26.5 32.5
Subject 899 628 877
Annot | Symbols: ATFH6, FH6 | formin homolog 6 | chr5:26926835-26930212 FORWARD LENGTH=899
NR gb|EAY88952.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 619 1 536 0.0 132.5 71.1 75.4
Subject 820 244 804
Annot hypothetical protein OsI_10435 [Oryza sativa Indica Group]
IRGSP Os03t0204100-01_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 619 291 536 e-125 144.1 35.1 38
Subject 892 632 876
Annot
Sbicolor Sobic.001G464600.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 619 291 535 e-131 152 37 38.8
Subject 941 680 924
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00002.1.g11050.1.am.mk length: 619 aa.
IPR015425 Formin, FH2 domain
method AccNumber shortName E-value location
HMMPfam PF02181 FH2 3.6e-57 204-291
291-500
HMMSmart SM00498 Formin 2.4e-36 199-515
ProfileScan PS51444 FH2 16.300 110-527
superfamily SSF101447 Formin 7.5e-14 264-532
128-291
no_ID  
Coil coil coiled-coil NA 447-468
FPrintScan PR01217 PRICHEXTENSN 2.3e-09 32-44
53-74
80-96
102-119
124-149
HMMPanther PTHR23213 FORMIN-RELATED 3.1e-92 32-512
Seg seg seg NA 11-49
53-76
87-145
597-604
Pseudomolecule
Chromosome Start End Strand
11615853916163358-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00002.1 maker_non_over exon 5224601 5224679 . - . ID=Zjn_sc00002.1.g11050.1.am.mk:exon:6
Zjn_sc00002.1 maker_non_over exon 5225015 5225097 . - . ID=Zjn_sc00002.1.g11050.1.am.mk:exon:5
Zjn_sc00002.1 maker_non_over exon 5226378 5226468 . - . ID=Zjn_sc00002.1.g11050.1.am.mk:exon:4
Zjn_sc00002.1 maker_non_over exon 5226593 5227326 . - . ID=Zjn_sc00002.1.g11050.1.am.mk:exon:3
Zjn_sc00002.1 maker_non_over exon 5228453 5228633 . - . ID=Zjn_sc00002.1.g11050.1.am.mk:exon:2
Zjn_sc00002.1 maker_non_over exon 5228729 5229420 . - . ID=Zjn_sc00002.1.g11050.1.am.mk:exon:1

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