Z. japonica Nagirizaki
Zjn_sc00002.1.g10510.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G15490.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 420 88 420 e-172 114.3 69.8 75.5
Subject 480 96 480
Annot | Symbols: | UDP-glucose 6-dehydrogenase family protein | chr5:5027872-5029314 REVERSE LENGTH=480
NR ref|XP_004985226.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 420 88 420 0.0 114.3 76.7 78.1
Subject 480 96 480
Annot PREDICTED: UDP-glucose 6-dehydrogenase 4-like [Setaria italica]
IRGSP Os12t0443500-01_chr12_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 420 88 420 e-179 114.3 73.1 76.7
Subject 480 96 480
Annot
Sbicolor Sobic.001G459800.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 420 88 420 0.0 114.3 76.7 77.6
Subject 480 96 480
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00002.1.g10510.1.sm.mkhc length: 420 aa.
IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal
method AccNumber shortName E-value location
Molecular Function GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor    
Molecular Function GO:0051287 NAD binding    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF03721 UDPG_MGDP_dh_N 8.3e-25 90-171
IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like
Biological Process GO:0055114 oxidation-reduction process    
superfamily SSF48179 6-phosphogluconate 5e-23 149-250
IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation
Molecular Function GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor    
Molecular Function GO:0051287 NAD binding    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF00984 UDPG_MGDP_dh 1.4e-23 164-246
IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal
Molecular Function GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor    
Molecular Function GO:0051287 NAD binding    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF03720 UDPG_MGDP_dh_C 1.3e-35 268-392
HMMSmart SM00984 UDP 6.3e-38 268-392
superfamily SSF52413 UDP-glucose/GDP-mannose 1.3e-36 253-403
IPR016040 NAD(P)-binding domain
Gene3D G3DSA:3.40.50.720 no description 1.3e-95 87-184
185-415
no_ID  
HMMPanther PTHR11374 UDP-GLUCOSE 7.3e-165 88-408
superfamily SSF51735 NAD(P)-binding 5.6e-11 87-167
Pseudomolecule
Chromosome Start End Strand
11593265115935611-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00002.1 maker exon 4998713 4999480 . - . ID=Zjn_sc00002.1.g10510.1.sm.mkhc:exon:3
Zjn_sc00002.1 maker exon 4999630 4999867 . - . ID=Zjn_sc00002.1.g10510.1.sm.mkhc:exon:2
Zjn_sc00002.1 maker exon 5001417 5001673 . - . ID=Zjn_sc00002.1.g10510.1.sm.mkhc:exon:1

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