Z. japonica Nagirizaki
Zjn_sc00002.1.g10340.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G29575.4 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 371 284 367 6e-26 62.3 14.3 19.4
Subject 231 144 229
Annot | Symbols: AFP3 | ABI five binding protein 3 | chr3:11382416-11383657 REVERSE LENGTH=231
NR ref|NP_001131584.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 371 5 367 e-104 105.9 60.4 70.9
Subject 393 4 391
Annot hypothetical protein LOC100192929 isoform 1 [Zea mays] gi|226713190|sp|B4FAF3.1|NNJA1_MAIZE RecName: Full=Ninja-family protein 1 gi|194690024|gb|ACF79096.1| unknown [Zea mays] gi|194691932|gb|ACF80050.1| unknown [Zea mays] gi|195638284|gb|ACG38610.1| hypothetical protein [Zea mays] gi|413956550|gb|AFW89199.1| hypothetical protein ZEAMMB73_953040 [Zea mays]
IRGSP Os03t0214200-01_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 371 5 367 5e-91 108.1 60.6 70.4
Subject 401 4 397
Annot
Sbicolor Sobic.001G456400.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 371 5 371 e-103 106.2 61.5 72
Subject 394 4 394
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00002.1.g10340.1.sm.mkhc length: 371 aa.
IPR012463 Ninja
method AccNumber shortName E-value location
HMMPfam PF07897 DUF1675 1.9e-44 34-92
141-362
no_ID  
HMMPanther PTHR31413 FAMILY 8e-40 115-371
HMMPanther PTHR31413:SF0 SUBFAMILY 8e-40 115-371
Seg seg seg NA 37-52
123-136
Pseudomolecule
Chromosome Start End Strand
11585137915854937+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00002.1 maker exon 4917441 4917876 . + . ID=Zjn_sc00002.1.g10340.1.sm.mkhc:exon:1
Zjn_sc00002.1 maker exon 4918822 4919166 . + . ID=Zjn_sc00002.1.g10340.1.sm.mkhc:exon:2
Zjn_sc00002.1 maker exon 4919914 4920999 . + . ID=Zjn_sc00002.1.g10340.1.sm.mkhc:exon:3

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