Z. japonica Nagirizaki
Zjn_sc00002.1.g10130.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G51340.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 415 183 333 7e-54 122.7 24.8 29.4
Subject 509 305 455
Annot | Symbols: | MATE efflux family protein | chr1:19032034-19034681 FORWARD LENGTH=509
NR ref|XP_010092986.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 415 139 355 7e-72 122.4 34 40.5
Subject 508 236 453
Annot MATE efflux family protein 1 [Morus notabilis] gi|587863365|gb|EXB53135.1| MATE efflux family protein 1 [Morus notabilis]
IRGSP Os03t0216700-01_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 415 184 335 2e-69 137.6 31.6 33.7
Subject 571 368 519
Annot
Sbicolor Sobic.001G454900.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 415 184 333 4e-72 136.1 32.5 34
Subject 565 362 511
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00002.1.g10130.1.sm.mkhc length: 415 aa.
IPR002528 Multi antimicrobial extrusion protein
method AccNumber shortName E-value location
Biological Process GO:0006855 drug transmembrane transport    
Molecular Function GO:0015238 drug transmembrane transporter activity    
Molecular Function GO:0015297 antiporter activity    
Cellular Component GO:0016020 membrane    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF01554 MatE 2.2e-09 192-332
no_ID  
HMMPanther PTHR11206 MULTIDRUG 4.4e-100 27-333
HMMPanther PTHR11206:SF47 MATE 4.4e-100 27-333
Seg seg seg NA 29-43
88-105
Pseudomolecule
Chromosome Start End Strand
11575735515761644+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00002.1 maker exon 4823417 4823631 . + . ID=Zjn_sc00002.1.g10130.1.sm.mkhc:exon:1
Zjn_sc00002.1 maker exon 4823731 4823852 . + . ID=Zjn_sc00002.1.g10130.1.sm.mkhc:exon:2
Zjn_sc00002.1 maker exon 4824698 4824774 . + . ID=Zjn_sc00002.1.g10130.1.sm.mkhc:exon:3
Zjn_sc00002.1 maker exon 4825328 4825463 . + . ID=Zjn_sc00002.1.g10130.1.sm.mkhc:exon:4
Zjn_sc00002.1 maker exon 4826081 4826244 . + . ID=Zjn_sc00002.1.g10130.1.sm.mkhc:exon:5
Zjn_sc00002.1 maker exon 4826346 4826417 . + . ID=Zjn_sc00002.1.g10130.1.sm.mkhc:exon:6
Zjn_sc00002.1 maker exon 4826493 4826609 . + . ID=Zjn_sc00002.1.g10130.1.sm.mkhc:exon:7
Zjn_sc00002.1 maker exon 4826695 4826790 . + . ID=Zjn_sc00002.1.g10130.1.sm.mkhc:exon:8
Zjn_sc00002.1 maker exon 4827165 4827203 . + . ID=Zjn_sc00002.1.g10130.1.sm.mkhc:exon:9
Zjn_sc00002.1 maker exon 4827497 4827706 . + . ID=Zjn_sc00002.1.g10130.1.sm.mkhc:exon:10

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