Z. japonica Nagirizaki
Zjn_sc00002.1.g09450.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G49680.2 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 464 128 463 e-142 88.6 49.6 61.2
Subject 411 76 410
Annot | Symbols: ATBCAT-3, BCAT3 | branched-chain aminotransferase 3 | chr3:18422768-18425473 FORWARD LENGTH=411
NR gb|ACN28677.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 464 68 464 0.0 86.9 70 75.9
Subject 403 3 403
Annot unknown [Zea mays] gi|414865650|tpg|DAA44207.1| TPA: branched-chain-amino-acid aminotransferase [Zea mays]
IRGSP Os03t0231600-01_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 464 98 464 e-174 89.4 65.1 71.3
Subject 415 49 415
Annot
Sbicolor Sobic.001G447500.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 464 102 464 0.0 88.4 67 71.3
Subject 410 49 410
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00002.1.g09450.1.sm.mkhc length: 464 aa.
IPR001544 Aminotransferase, class IV
method AccNumber shortName E-value location
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
HMMPanther PTHR11825 SUBGROUP 6.3e-162 128-464
HMMPfam PF01063 Aminotran_4 9e-37 201-444
superfamily SSF56752 D-aminoacid 2.2e-99 128-461
IPR005786 Branched-chain amino acid aminotransferase II
Molecular Function GO:0004084 branched-chain-amino-acid transaminase activity    
Biological Process GO:0009081 branched-chain amino acid metabolic process    
HMMPanther PTHR11825:SF2 BRANCHED-CHAIN 6.3e-162 128-464
HMMTigr TIGR01123 ilvE_II: 1.1e-95 158-463
IPR018300 Aminotransferase, class IV, conserved site
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
PatternScan PS00770 AA_TRANSFER_CLASS_4 NA 347-376
no_ID  
Gene3D G3DSA:3.20.10.10 no description 1.5e-56 289-449
Gene3D G3DSA:3.30.470.10 no description 2.5e-66 118-288
Seg seg seg NA 37-48
67-80
252-267
411-423
Pseudomolecule
Chromosome Start End Strand
11544256215449823+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00002.1 maker exon 4508624 4508725 . + . ID=Zjn_sc00002.1.g09450.1.sm.mkhc:exon:1
Zjn_sc00002.1 maker exon 4508758 4509014 . + . ID=Zjn_sc00002.1.g09450.1.sm.mkhc:exon:2
Zjn_sc00002.1 maker exon 4509106 4509289 . + . ID=Zjn_sc00002.1.g09450.1.sm.mkhc:exon:3
Zjn_sc00002.1 maker exon 4509429 4509608 . + . ID=Zjn_sc00002.1.g09450.1.sm.mkhc:exon:4
Zjn_sc00002.1 maker exon 4509733 4510176 . + . ID=Zjn_sc00002.1.g09450.1.sm.mkhc:exon:5
Zjn_sc00002.1 maker exon 4510291 4510403 . + . ID=Zjn_sc00002.1.g09450.1.sm.mkhc:exon:6
Zjn_sc00002.1 maker exon 4510491 4515885 . + . ID=Zjn_sc00002.1.g09450.1.sm.mkhc:exon:7

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