Z. japonica Nagirizaki
Zjn_sc00002.1.g08500.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G21050.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 522 12 468 0.0 92.5 76.4 82.4
Subject 483 5 461
Annot | Symbols: LAX2 | like AUXIN RESISTANT 2 | chr2:9034289-9036439 FORWARD LENGTH=483
NR ref|XP_003561828.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 522 1 521 0.0 100.6 89.1 93.7
Subject 525 1 521
Annot PREDICTED: auxin transporter-like protein 3 [Brachypodium distachyon]
IRGSP Os03t0244600-01_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 522 1 468 0.0 100.4 84.9 87
Subject 524 1 470
Annot
Sbicolor Sobic.001G439000.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 522 2 498 0.0 100.2 88.1 90.6
Subject 523 3 500
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00002.1.g08500.1.sm.mkhc length: 522 aa.
IPR013057 Amino acid transporter, transmembrane
method AccNumber shortName E-value location
HMMPfam PF01490 Aa_trans 3.7e-76 45-435
no_ID  
HMMPanther PTHR22950 AMINO 0 11-466
HMMPanther PTHR22950:SF3 AUX1-LIKE 0 11-466
Seg seg seg NA 430-447
499-507
508-520
Pseudomolecule
Chromosome Start End Strand
11504759315051327-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00002.1 maker exon 4113655 4114229 . - . ID=Zjn_sc00002.1.g08500.1.sm.mkhc:exon:7
Zjn_sc00002.1 maker exon 4114819 4115284 . - . ID=Zjn_sc00002.1.g08500.1.sm.mkhc:exon:6
Zjn_sc00002.1 maker exon 4116212 4116309 . - . ID=Zjn_sc00002.1.g08500.1.sm.mkhc:exon:5
Zjn_sc00002.1 maker exon 4116399 4116582 . - . ID=Zjn_sc00002.1.g08500.1.sm.mkhc:exon:4
Zjn_sc00002.1 maker exon 4116661 4116773 . - . ID=Zjn_sc00002.1.g08500.1.sm.mkhc:exon:3
Zjn_sc00002.1 maker exon 4116868 4117053 . - . ID=Zjn_sc00002.1.g08500.1.sm.mkhc:exon:2
Zjn_sc00002.1 maker exon 4117172 4117389 . - . ID=Zjn_sc00002.1.g08500.1.sm.mkhc:exon:1

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