Z. japonica Nagirizaki
Zjn_sc00002.1.g07010.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G39940.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 356 3 349 e-120 166.3 59.3 76.7
Subject 592 234 585
Annot | Symbols: COI1 | RNI-like superfamily protein | chr2:16672848-16675486 REVERSE LENGTH=592
NR ref|XP_004984685.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 356 1 354 e-169 166.3 78.7 88.5
Subject 592 237 590
Annot PREDICTED: coronatine-insensitive protein 1-like [Setaria italica]
IRGSP Os03t0265500-02_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 356 1 356 e-161 165.4 77 86.2
Subject 589 234 589
Annot
Sbicolor Sobic.001G426900.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 356 1 354 e-170 166 78.1 88.2
Subject 591 236 589
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00002.1.g07010.1.sm.mkhc length: 356 aa.
no_ID  
method AccNumber shortName E-value location
Gene3D G3DSA:3.80.10.10 no description 5.4e-09 60-182
187-296
HMMPanther PTHR23125 F-BOX/LEUCINE 1.1e-171 3-317
HMMPanther PTHR23125:SF94 SUBFAMILY 1.1e-171 3-317
superfamily SSF52047 RNI-like 7.3e-17 42-296
Pseudomolecule
Chromosome Start End Strand
11444690014449204-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00002.1 maker exon 3512962 3514652 . - . ID=Zjn_sc00002.1.g07010.1.sm.mkhc:exon:2
Zjn_sc00002.1 maker exon 3514762 3515266 . - . ID=Zjn_sc00002.1.g07010.1.sm.mkhc:exon:1

Top