Z. japonica Nagirizaki
Zjn_sc00002.1.g05400.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G37090.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 124 1 103 2e-25 283.1 42.7 59.7
Subject 351 242 341
Annot | Symbols: IRX9 | Nucleotide-diphospho-sugar transferases superfamily protein | chr2:15587671-15589223 REVERSE LENGTH=351
NR ref|XP_004984832.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 124 1 112 7e-53 282.3 83.1 85.5
Subject 350 236 350
Annot PREDICTED: probable glucuronosyltransferase Os03g0287800 [Setaria italica]
IRGSP Os05t0123100-01_chr05_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 124 1 112 4e-35 299.2 59.7 72.6
Subject 371 235 369
Annot
Sbicolor Sobic.001G409100.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 124 1 106 2e-52 296 79.8 81.5
Subject 367 238 350
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00002.1.g05400.1.sm.mkhc length: 124 aa.
IPR005027 Glycosyl transferase, family 43
method AccNumber shortName E-value location
Molecular Function GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity    
Cellular Component GO:0016020 membrane    
HMMPanther PTHR10896 GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 5.4e-44 1-110
HMMPfam PF03360 Glyco_transf_43 4.3e-14 7-105
no_ID  
Gene3D G3DSA:3.90.550.10 no description 3.2e-24 7-121
HMMPanther PTHR10896:SF1 BETA-1,3-GLUCURONYLTRANSFERASE 5.4e-44 1-110
Seg seg seg NA 109-118
superfamily SSF53448 Nucleotide-diphospho-sugar 2.6e-18 7-122
Pseudomolecule
Chromosome Start End Strand
11376550613767177-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00002.1 maker exon 2831568 2832082 . - . ID=Zjn_sc00002.1.g05400.1.sm.mkhc:exon:2
Zjn_sc00002.1 maker exon 2833027 2833239 . - . ID=Zjn_sc00002.1.g05400.1.sm.mkhc:exon:1

Top