Z. japonica Nagirizaki
Zjn_sc00002.1.g05050.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G33070.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 373 1 282 e-111 162.7 53.1 61.7
Subject 607 1 284
Annot | Symbols: | Thiamine pyrophosphate dependent pyruvate decarboxylase family protein | chr4:15952519-15954676 REVERSE LENGTH=607
NR dbj|BAJ94428.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 373 1 280 e-134 162.5 63.5 68.1
Subject 606 1 281
Annot predicted protein [Hordeum vulgare subsp. vulgare] gi|326528981|dbj|BAJ97512.1| predicted protein [Hordeum vulgare subsp. vulgare]
IRGSP Os03t0293500-01_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 373 1 284 e-129 103.8 63.8 67.8
Subject 387 1 285
Annot
Sbicolor Sobic.001G405500.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 373 1 284 e-134 163.5 63.8 67.6
Subject 610 1 289
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00002.1.g05050.1.sm.mkhc length: 373 aa.
IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain
method AccNumber shortName E-value location
Molecular Function GO:0030976 thiamine pyrophosphate binding    
HMMPfam PF02776 TPP_enzyme_N 5.4e-37 45-211
IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme
HMMPanther PTHR18968:SF4 PYRUVATE 3.2e-101 42-286
no_ID  
Gene3D G3DSA:3.40.50.970 no description 5e-20 43-222
256-359
HMMPanther PTHR18968 THIAMINE 3.2e-101 42-286
ProfileScan PS51257 PROKAR_LIPOPROTEIN 5.000 1-22
Seg seg seg NA 93-108
superfamily SSF52518 Thiamin 7.4e-17 42-227
256-373
Pseudomolecule
Chromosome Start End Strand
11361837813621383+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00002.1 maker exon 2684440 2685030 . + . ID=Zjn_sc00002.1.g05050.1.sm.mkhc:exon:1
Zjn_sc00002.1 maker exon 2685106 2685269 . + . ID=Zjn_sc00002.1.g05050.1.sm.mkhc:exon:2
Zjn_sc00002.1 maker exon 2685557 2685629 . + . ID=Zjn_sc00002.1.g05050.1.sm.mkhc:exon:3
Zjn_sc00002.1 maker exon 2686508 2686696 . + . ID=Zjn_sc00002.1.g05050.1.sm.mkhc:exon:4
Zjn_sc00002.1 maker exon 2686783 2687445 . + . ID=Zjn_sc00002.1.g05050.1.sm.mkhc:exon:5

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