Z. japonica Nagirizaki
Zjn_sc00002.1.g04650.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G33680.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 476 70 476 0.0 96.8 72.1 80.5
Subject 461 55 461
Annot | Symbols: AGD2 | Pyridoxal phosphate (PLP)-dependent transferases superfamily protein | chr4:16171847-16174630 REVERSE LENGTH=461
NR ref|XP_004958319.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 476 69 476 0.0 97.5 82.8 84
Subject 464 57 464
Annot PREDICTED: probable LL-diaminopimelate aminotransferase, chloroplastic [Setaria italica]
IRGSP Os03t0299900-01_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 476 69 476 0.0 97.5 81.1 83.6
Subject 464 57 464
Annot
Sbicolor Sobic.001G401700.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 476 69 476 0.0 97.1 82.1 83.8
Subject 462 55 462
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00002.1.g04650.1.sm.mkhc length: 476 aa.
IPR004839 Aminotransferase, class I/classII
method AccNumber shortName E-value location
Biological Process GO:0009058 biosynthetic process    
Molecular Function GO:0030170 pyridoxal phosphate binding    
HMMPfam PF00155 Aminotran_1_2 1.9e-35 107-470
IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.40.640.10 no description 2.9e-39 121-332
IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.90.1150.10 no description 8.6e-28 333-475
IPR015424 Pyridoxal phosphate-dependent transferase
superfamily SSF53383 PLP-dependent 6.7e-77 76-472
IPR019942 Diaminopimelate aminotransferase, DapL, plant/Chlamydia-type
Biological Process GO:0009089 lysine biosynthetic process via diaminopimelate    
Molecular Function GO:0010285 L,L-diaminopimelate aminotransferase activity    
HAMAP MF_01642 DapL_aminotrans_1 46.542 75-474
HMMPanther PTHR11751:SF22 AMINOTRANSFERASE 3e-239 77-476
HMMTigr TIGR03542 DAPAT_plant: 1.4e-157 76-473
no_ID  
HMMPanther PTHR11751 SUBGROUP 3e-239 77-476
Seg seg seg NA 2-10
441-452
Pseudomolecule
Chromosome Start End Strand
11346102113464450-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00002.1 maker exon 2527083 2527955 . - . ID=Zjn_sc00002.1.g04650.1.sm.mkhc:exon:10
Zjn_sc00002.1 maker exon 2528029 2528235 . - . ID=Zjn_sc00002.1.g04650.1.sm.mkhc:exon:9
Zjn_sc00002.1 maker exon 2528383 2528703 . - . ID=Zjn_sc00002.1.g04650.1.sm.mkhc:exon:8
Zjn_sc00002.1 maker exon 2528905 2528955 . - . ID=Zjn_sc00002.1.g04650.1.sm.mkhc:exon:7
Zjn_sc00002.1 maker exon 2529039 2529143 . - . ID=Zjn_sc00002.1.g04650.1.sm.mkhc:exon:6
Zjn_sc00002.1 maker exon 2529465 2529527 . - . ID=Zjn_sc00002.1.g04650.1.sm.mkhc:exon:5
Zjn_sc00002.1 maker exon 2529736 2529852 . - . ID=Zjn_sc00002.1.g04650.1.sm.mkhc:exon:4
Zjn_sc00002.1 maker exon 2529939 2530006 . - . ID=Zjn_sc00002.1.g04650.1.sm.mkhc:exon:3
Zjn_sc00002.1 maker exon 2530282 2530429 . - . ID=Zjn_sc00002.1.g04650.1.sm.mkhc:exon:2
Zjn_sc00002.1 maker exon 2530456 2530512 . - . ID=Zjn_sc00002.1.g04650.1.sm.mkhc:exon:1

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