Z. japonica Nagirizaki
Zjn_sc00002.1.g03180.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G56850.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 248 12 237 2e-17 119.8 37.9 48.4
Subject 297 6 271
Annot | Symbols: AREB3, DPBF3 | ABA-responsive element binding protein 3 | chr3:21046554-21047894 REVERSE LENGTH=297
NR ref|XP_002465343.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 248 7 237 4e-59 96.4 59.3 64.9
Subject 239 2 213
Annot hypothetical protein SORBIDRAFT_01g036810 [Sorghum bicolor] gi|241919197|gb|EER92341.1| hypothetical protein SORBIDRAFT_01g036810 [Sorghum bicolor]
IRGSP Os03t0322700-00_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 248 1 243 7e-47 98.4 53.2 62.1
Subject 244 1 217
Annot
Sbicolor Sobic.001G388300.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 248 1 237 3e-64 98.4 60.9 66.9
Subject 244 1 218
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00002.1.g03180.1.am.mk length: 248 aa.
IPR004827 Basic-leucine zipper domain
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
HMMPfam PF00170 bZIP_1 2.4e-05 162-183
PatternScan PS00036 BZIP_BASIC NA 165-180
no_ID  
Coil coil coiled-coil NA 216-237
Gene3D G3DSA:1.20.5.170 no description 1.8e-10 213-235
HMMPanther PTHR22952 CAMP-RESPONSE 1.3e-16 1-234
HMMPanther PTHR22952:SF50 OS11G0152700 1.3e-16 1-234
Seg seg seg NA 2-27
86-99
101-115
Pseudomolecule
Chromosome Start End Strand
11272864412729390+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00002.1 maker_non_over exon 1794706 1795452 . + . ID=Zjn_sc00002.1.g03180.1.am.mk:exon:1

Top