Z. japonica Nagirizaki
Zjn_sc00002.1.g01900.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G08860.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 443 6 426 e-160 108.6 61.6 72.9
Subject 481 24 400
Annot | Symbols: PYD4 | PYRIMIDINE 4 | chr3:2696754-2699087 REVERSE LENGTH=481
NR gb|ACG45038.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 443 1 426 0.0 105.9 79.2 82.4
Subject 469 2 388
Annot alanine--glyoxylate aminotransferase 2 [Zea mays]
IRGSP Os03t0338000-01_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 443 1 426 0.0 109.3 77.2 80.1
Subject 484 20 403
Annot
Sbicolor Sobic.001G379000.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 443 1 426 0.0 105 79.5 83.1
Subject 465 1 384
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00002.1.g01900.1.am.mk length: 443 aa.
IPR005814 Aminotransferase class-III
method AccNumber shortName E-value location
Molecular Function GO:0008483 transaminase activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
HMMPanther PTHR11986 AMINOTRANSFERASE 2.9e-185 27-426
HMMPfam PF00202 Aminotran_3 1.9e-12 69-332
352-426
PatternScan PS00600 AA_TRANSFER_CLASS_3 NA 298-336
IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.40.640.10 no description 5.7e-54 102-332
IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.90.1150.10 no description 6.8e-18 47-101
352-426
IPR015424 Pyridoxal phosphate-dependent transferase
superfamily SSF53383 PLP-dependent 3.8e-87 42-426
no_ID  
HMMPanther PTHR11986:SF23 ALANINE-GLYOXYLATE 2.9e-185 27-426
Seg seg seg NA 17-26
Pseudomolecule
Chromosome Start End Strand
11213005112131847-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00002.1 maker_non_over exon 1196113 1196391 . - . ID=Zjn_sc00002.1.g01900.1.am.mk:exon:6
Zjn_sc00002.1 maker_non_over exon 1196429 1196668 . - . ID=Zjn_sc00002.1.g01900.1.am.mk:exon:5
Zjn_sc00002.1 maker_non_over exon 1196808 1196951 . - . ID=Zjn_sc00002.1.g01900.1.am.mk:exon:4
Zjn_sc00002.1 maker_non_over exon 1197021 1197236 . - . ID=Zjn_sc00002.1.g01900.1.am.mk:exon:3
Zjn_sc00002.1 maker_non_over exon 1197345 1197599 . - . ID=Zjn_sc00002.1.g01900.1.am.mk:exon:2
Zjn_sc00002.1 maker_non_over exon 1197712 1197909 . - . ID=Zjn_sc00002.1.g01900.1.am.mk:exon:1

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