Z. japonica Nagirizaki
Zjn_sc00001.1.g12360.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G32900.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 516 75 516 e-177 118.2 62.6 73.1
Subject 610 78 610
Annot | Symbols: | UDP-Glycosyltransferase superfamily protein | chr1:11920582-11923506 REVERSE LENGTH=610
NR ref|XP_004956034.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 516 1 516 0.0 117.6 88.6 94
Subject 607 1 607
Annot PREDICTED: granule-bound starch synthase 1b, chloroplastic/amyloplastic [Setaria italica]
IRGSP Os07t0412100-01_chr07_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 516 1 516 0.0 117.8 83.9 89.3
Subject 608 1 608
Annot
Sbicolor Sobic.002G116000.1.p|Chr02|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 516 1 516 0.0 117.6 87.6 93.2
Subject 607 1 607
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00001.1.g12360.1.sm.mkhc length: 516 aa.
IPR011835 Glycogen/starch synthase, ADP-glucose type
method AccNumber shortName E-value location
Molecular Function GO:0009011 starch synthase activity    
Biological Process GO:0009250 glucan biosynthetic process    
HMMTigr TIGR02095 glgA: 1.2e-106 81-448
IPR013534 Starch synthase, catalytic domain
HMMPfam PF08323 Glyco_transf_5 2.4e-71 83-342
no_ID  
Gene3D G3DSA:3.40.50.2000 no description 2.1e-27 356-446
HMMPanther PTHR12526 GLYCOSYLTRANSFERASE 2.7e-99 67-449
HMMPanther PTHR12526:SF17 STARCH 2.7e-99 67-449
Seg seg seg NA 97-114
442-450
superfamily SSF53756 UDP-Glycosyltransferase/glycogen 3.6e-69 80-482
Pseudomolecule
Chromosome Start End Strand
436857433692936-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00001.1 maker exon 7604388 7604472 . + . ID=Zjn_sc00001.1.g12360.1.sm.mkhc:exon:1
Zjn_sc00001.1 maker exon 7605931 7606276 . + . ID=Zjn_sc00001.1.g12360.1.sm.mkhc:exon:2
Zjn_sc00001.1 maker exon 7606519 7606599 . + . ID=Zjn_sc00001.1.g12360.1.sm.mkhc:exon:3
Zjn_sc00001.1 maker exon 7606702 7606800 . + . ID=Zjn_sc00001.1.g12360.1.sm.mkhc:exon:4
Zjn_sc00001.1 maker exon 7606891 7606980 . + . ID=Zjn_sc00001.1.g12360.1.sm.mkhc:exon:5
Zjn_sc00001.1 maker exon 7609315 7609378 . + . ID=Zjn_sc00001.1.g12360.1.sm.mkhc:exon:6
Zjn_sc00001.1 maker exon 7609448 7609548 . + . ID=Zjn_sc00001.1.g12360.1.sm.mkhc:exon:7
Zjn_sc00001.1 maker exon 7609659 7609768 . + . ID=Zjn_sc00001.1.g12360.1.sm.mkhc:exon:8
Zjn_sc00001.1 maker exon 7609861 7610107 . + . ID=Zjn_sc00001.1.g12360.1.sm.mkhc:exon:9
Zjn_sc00001.1 maker exon 7610184 7610360 . + . ID=Zjn_sc00001.1.g12360.1.sm.mkhc:exon:10
Zjn_sc00001.1 maker exon 7610439 7610483 . + . ID=Zjn_sc00001.1.g12360.1.sm.mkhc:exon:11
Zjn_sc00001.1 maker exon 7610856 7610942 . + . ID=Zjn_sc00001.1.g12360.1.sm.mkhc:exon:12
Zjn_sc00001.1 maker exon 7611231 7611581 . + . ID=Zjn_sc00001.1.g12360.1.sm.mkhc:exon:13

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