Z. japonica Nagirizaki
Zjn_sc00001.1.g04950.1.am.mkhc ( /TE )
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G43100.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 645 57 645 0.0 97.8 54 70.5
Subject 631 30 624
Annot | Symbols: | Eukaryotic aspartyl protease family protein | chr5:17299264-17302718 FORWARD LENGTH=631
NR ref|NP_001168795.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 645 21 645 0.0 97.8 85.3 90.7
Subject 631 1 631
Annot uncharacterized protein LOC100382594 precursor [Zea mays] gi|223973065|gb|ACN30720.1| unknown [Zea mays]
IRGSP Os07t0592200-02_chr07_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 645 21 645 0.0 97.8 84.3 89.9
Subject 631 1 631
Annot
Sbicolor Sobic.002G361300.1.p|Chr02|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 645 21 645 0.0 98 86.4 90.7
Subject 632 1 632
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00001.1.g04950.1.am.mkhc length: 645 aa.
IPR001461 Peptidase A1
method AccNumber shortName E-value location
Molecular Function GO:0004190 aspartic-type endopeptidase activity    
Biological Process GO:0006508 proteolysis    
FPrintScan PR00792 PEPSIN 1.4e-06 108-128
313-324
416-431
HMMPanther PTHR13683 ASPARTYL 1e-129 71-501
HMMPfam PF00026 Asp 6e-34 102-439
IPR001969 Peptidase aspartic, active site
Molecular Function GO:0004190 aspartic-type endopeptidase activity    
Biological Process GO:0006508 proteolysis    
PatternScan PS00141 ASP_PROTEASE NA 117-128
IPR021109 Aspartic peptidase
Gene3D G3DSA:2.40.70.10 no description 1.7e-45 104-236
237-460
superfamily SSF50630 Acid 6.4e-91 92-451
no_ID  
HMMPanther PTHR13683:SF98 CHLOROPLAST 1e-129 71-501
Seg seg seg NA 34-46
Pseudomolecule
Chromosome Start End Strand
491143039121086-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00001.1 maker exon 2176238 2176536 . + . ID=Zjn_sc00001.1.g04950.1.am.mkhc:exon:1
Zjn_sc00001.1 maker exon 2176647 2176767 . + . ID=Zjn_sc00001.1.g04950.1.am.mkhc:exon:2
Zjn_sc00001.1 maker exon 2178235 2178662 . + . ID=Zjn_sc00001.1.g04950.1.am.mkhc:exon:3
Zjn_sc00001.1 maker exon 2178755 2178911 . + . ID=Zjn_sc00001.1.g04950.1.am.mkhc:exon:4
Zjn_sc00001.1 maker exon 2179405 2179487 . + . ID=Zjn_sc00001.1.g04950.1.am.mkhc:exon:5
Zjn_sc00001.1 maker exon 2179589 2179685 . + . ID=Zjn_sc00001.1.g04950.1.am.mkhc:exon:6
Zjn_sc00001.1 maker exon 2179796 2179868 . + . ID=Zjn_sc00001.1.g04950.1.am.mkhc:exon:7
Zjn_sc00001.1 maker exon 2180186 2180371 . + . ID=Zjn_sc00001.1.g04950.1.am.mkhc:exon:8
Zjn_sc00001.1 maker exon 2180961 2181082 . + . ID=Zjn_sc00001.1.g04950.1.am.mkhc:exon:9
Zjn_sc00001.1 maker exon 2181241 2181342 . + . ID=Zjn_sc00001.1.g04950.1.am.mkhc:exon:10
Zjn_sc00001.1 maker exon 2181422 2181519 . + . ID=Zjn_sc00001.1.g04950.1.am.mkhc:exon:11
Zjn_sc00001.1 maker exon 2181914 2183021 . + . ID=Zjn_sc00001.1.g04950.1.am.mkhc:exon:12

Top