Z. japonica Nagirizaki
Zjn_sc00001.1.g04430.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G13740.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 301 4 298 4e-40 115.6 39.2 54.8
Subject 348 30 342
Annot | Symbols: AFP2 | ABI five binding protein 2 | chr1:4713969-4715158 FORWARD LENGTH=348
NR ref|XP_004958231.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 301 1 300 4e-83 105.6 62.5 74.8
Subject 318 1 313
Annot PREDICTED: ninja-family protein 3-like [Setaria italica]
IRGSP Os07t0602900-01_chr07_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 301 2 298 4e-73 106 62.8 73.4
Subject 319 3 312
Annot
Sbicolor Sobic.002G367100.1.p|Chr02|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 301 1 300 1e-70 113.6 58.5 71.1
Subject 342 1 337
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00001.1.g04430.1.sm.mk length: 301 aa.
IPR012463 Ninja
method AccNumber shortName E-value location
HMMPfam PF07897 DUF1675 3.2e-70 32-296
no_ID  
HMMPanther PTHR31413 FAMILY 4.3e-65 9-301
HMMPanther PTHR31413:SF0 SUBFAMILY 4.3e-65 9-301
Seg seg seg NA 107-119
156-194
Pseudomolecule
Chromosome Start End Strand
493537599355618-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00001.1 maker_non_over exon 1941706 1942171 . + . ID=Zjn_sc00001.1.g04430.1.sm.mk:exon:1
Zjn_sc00001.1 maker_non_over exon 1943126 1943565 . + . ID=Zjn_sc00001.1.g04430.1.sm.mk:exon:2

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