Z. japonica Nagirizaki
Zjn_sc00001.1.g03830.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G51420.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 333 18 320 2e-45 111.1 32.4 51.1
Subject 370 60 359
Annot | Symbols: SSL4, ATSSL4 | strictosidine synthase-like 4 | chr3:19084082-19085451 FORWARD LENGTH=370
NR ref|XP_004958290.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 333 15 333 e-149 111.4 79.6 86.2
Subject 371 46 365
Annot PREDICTED: protein STRICTOSIDINE SYNTHASE-LIKE 4-like [Setaria italica]
IRGSP Os07t0614000-02_chr07_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 333 15 328 e-129 110.2 72.7 81.7
Subject 367 48 361
Annot
Sbicolor Sobic.002G373100.1.p|Chr02|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 333 15 328 e-151 108.1 79 85.3
Subject 360 46 359
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00001.1.g03830.1.sm.mkhc length: 333 aa.
IPR011042 Six-bladed beta-propeller, TolB-like
method AccNumber shortName E-value location
Gene3D G3DSA:2.120.10.30 no description 1.5e-47 10-319
IPR018119 Strictosidine synthase, conserved region
Biological Process GO:0009058 biosynthetic process    
Molecular Function GO:0016844 strictosidine synthase activity    
HMMPfam PF03088 Str_synth 6.5e-23 117-202
no_ID  
HMMPanther PTHR10426 STRICTOSIDINE 9.5e-146 15-331
HMMPanther PTHR10426:SF16 HYPOTHETICAL 9.5e-146 15-331
superfamily SSF63829 Calcium-dependent 9.5e-43 18-324
Pseudomolecule
Chromosome Start End Strand
495882959589860+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00001.1 maker exon 1707464 1707760 . - . ID=Zjn_sc00001.1.g03830.1.sm.mkhc:exon:4
Zjn_sc00001.1 maker exon 1707874 1708006 . - . ID=Zjn_sc00001.1.g03830.1.sm.mkhc:exon:3
Zjn_sc00001.1 maker exon 1708085 1708389 . - . ID=Zjn_sc00001.1.g03830.1.sm.mkhc:exon:2
Zjn_sc00001.1 maker exon 1708490 1709029 . - . ID=Zjn_sc00001.1.g03830.1.sm.mkhc:exon:1

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