Z. japonica Nagirizaki
Zjn_sc00001.1.g03310.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G33510.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 491 30 479 0.0 103.3 72.1 81.3
Subject 507 25 499
Annot | Symbols: DHS2 | 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase | chr4:16116496-16118549 FORWARD LENGTH=507
NR ref|NP_001060314.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 491 1 491 0.0 109.4 90 95.5
Subject 537 1 537
Annot Os07g0622200 [Oryza sativa Japonica Group] gi|22296426|dbj|BAC10194.1| putative phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplast precursor [Oryza sativa Japonica Group] gi|113611850|dbj|BAF22228.1| Os07g0622200 [Oryza sativa Japonica Group] gi|125601125|gb|EAZ40701.1| hypothetical protein OsJ_25169 [Oryza sativa Japonica Group] gi|215740678|dbj|BAG97334.1| unnamed protein product [Oryza sativa Japonica Group]
IRGSP Os07t0622200-01_chr07_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 491 1 491 0.0 109.4 90 95.5
Subject 537 1 537
Annot
Sbicolor Sobic.002G379600.1.p|Chr02|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 491 1 491 0.0 110 90.6 94.7
Subject 540 1 540
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00001.1.g03310.1.sm.mkhc length: 491 aa.
IPR002480 DAHP synthetase, class II
method AccNumber shortName E-value location
Molecular Function GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity    
Biological Process GO:0009073 aromatic amino acid family biosynthetic process    
HMMPanther PTHR21337 PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE 2.7e-247 17-488
HMMPfam PF01474 DAHP_synth_2 2.4e-140 75-399
no_ID  
HMMPanther PTHR21337:SF0 SUBFAMILY 2.7e-247 17-488
Seg seg seg NA 2-22
59-75
116-128
484-489
superfamily SSF51569 Aldolase 9.7e-172 53-473
Pseudomolecule
Chromosome Start End Strand
497988479802291-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00001.1 maker exon 1495033 1495619 . + . ID=Zjn_sc00001.1.g03310.1.sm.mkhc:exon:1
Zjn_sc00001.1 maker exon 1495734 1496011 . + . ID=Zjn_sc00001.1.g03310.1.sm.mkhc:exon:2
Zjn_sc00001.1 maker exon 1496853 1497129 . + . ID=Zjn_sc00001.1.g03310.1.sm.mkhc:exon:3
Zjn_sc00001.1 maker exon 1497230 1497343 . + . ID=Zjn_sc00001.1.g03310.1.sm.mkhc:exon:4
Zjn_sc00001.1 maker exon 1497956 1498311 . + . ID=Zjn_sc00001.1.g03310.1.sm.mkhc:exon:5
Zjn_sc00001.1 maker exon 1498333 1498477 . + . ID=Zjn_sc00001.1.g03310.1.sm.mkhc:exon:6

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