Z. japonica Nagirizaki
Zjn_sc00001.1.g00340.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G41070.2 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 247 13 247 7e-45 106.1 47.8 60.3
Subject 262 16 262
Annot | Symbols: EEL, ATBZIP12, DPBF4 | Basic-leucine zipper (bZIP) transcription factor family protein | chr2:17131249-17132208 FORWARD LENGTH=262
NR ref|XP_002463425.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 247 12 247 1e-66 104.9 67.2 73.7
Subject 259 17 259
Annot hypothetical protein SORBIDRAFT_02g043620 [Sorghum bicolor] gi|241926802|gb|EER99946.1| hypothetical protein SORBIDRAFT_02g043620 [Sorghum bicolor]
IRGSP Os07t0686100-01_chr07_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 247 13 247 1e-67 110.9 62.3 68
Subject 274 20 274
Annot
Sbicolor Sobic.002G425600.1.p|Chr02|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 247 12 247 1e-69 106.9 67.2 73.7
Subject 264 22 264
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00001.1.g00340.1.am.mk length: 247 aa.
IPR004827 Basic-leucine zipper domain
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
HMMPfam PF00170 bZIP_1 1.4e-13 171-217
HMMSmart SM00338 basic 2.4e-09 167-245
PatternScan PS00036 BZIP_BASIC NA 174-189
ProfileScan PS50217 BZIP 11.185 169-213
no_ID  
Coil coil coiled-coil NA 190-218
Gene3D G3DSA:1.20.5.170 no description 2.9e-12 171-213
HMMPanther PTHR22952 CAMP-RESPONSE 8.6e-63 5-212
HMMPanther PTHR22952:SF50 OS11G0152700 8.6e-63 5-212
Seg seg seg NA 3-18
121-126
182-192
209-235
Pseudomolecule
Chromosome Start End Strand
41111306211114548-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00001.1 maker_non_over exon 182776 183348 . + . ID=Zjn_sc00001.1.g00340.1.am.mk:exon:1
Zjn_sc00001.1 maker_non_over exon 183429 183500 . + . ID=Zjn_sc00001.1.g00340.1.am.mk:exon:2
Zjn_sc00001.1 maker_non_over exon 184164 184262 . + . ID=Zjn_sc00001.1.g00340.1.am.mk:exon:3

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